Gene : AT5G55520 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24115:SF529 - KINESIN MOTOR FAMILY PROTEIN Genomic Order:  5017
Name:  ? AT5G55520 Secondary Identifier:  ? PAC:19667576
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G55520 0.5kb upstream 0.5kb upstream 3693 true Chr5: 22488074-22491766 Arabidopsis thaliana
AT5G55520 0.5kb upstream 0.5kb upstream 500 false Chr5: 22491267-22491766 Arabidopsis thaliana
AT5G55520 0.5kb downstream 0.5kb downstream 3693 true Chr5: 22487574-22491266 Arabidopsis thaliana
AT5G55520 0.5kb downstream 0.5kb downstream 500 false Chr5: 22487574-22488073 Arabidopsis thaliana
AT5G55520 1.0kb upstream 1.0kb upstream 4193 true Chr5: 22488074-22492266 Arabidopsis thaliana
AT5G55520 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22491267-22492266 Arabidopsis thaliana
AT5G55520 1.0kb downstream 1.0kb downstream 4193 true Chr5: 22487074-22491266 Arabidopsis thaliana
AT5G55520 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22487074-22488073 Arabidopsis thaliana
AT5G55520 2.0kb upstream 2.0kb upstream 5193 true Chr5: 22488074-22493266 Arabidopsis thaliana
AT5G55520 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22491267-22493266 Arabidopsis thaliana
AT5G55520 2.0kb downstream 2.0kb downstream 5193 true Chr5: 22486074-22491266 Arabidopsis thaliana
AT5G55520 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22486074-22488073 Arabidopsis thaliana
AT5G55520 5.0kb upstream 5.0kb upstream 8193 true Chr5: 22488074-22496266 Arabidopsis thaliana
AT5G55520 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22491267-22496266 Arabidopsis thaliana
AT5G55520 5.0kb downstream 5.0kb downstream 8193 true Chr5: 22483074-22491266 Arabidopsis thaliana
AT5G55520 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22483074-22488073 Arabidopsis thaliana
AT5G55520 10.0kb upstream 10.0kb upstream 13193 true Chr5: 22488074-22501266 Arabidopsis thaliana
AT5G55520 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22491267-22501266 Arabidopsis thaliana
AT5G55520 10.0kb downstream 10.0kb downstream 13193 true Chr5: 22478074-22491266 Arabidopsis thaliana
AT5G55520 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22478074-22488073 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026478 5273 Angiosperm View MSA
122365585 5261 Brassicaceae View MSA
123798987 5264 Brassicales-Malvales View MSA
124296558 5266 SBM View MSA
124148674 5268 Malvidae View MSA
123874625 5270 Rosid View MSA
123458572 5271 Pentapetalae View MSA
122493976 5272 Eudicot View MSA
121296351 5274 Embryophyte View MSA
123334530 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.423        
cufflinks 2.69        
cufflinks 0.736        
cufflinks 2.111        
cufflinks 0.489       Low
cufflinks 3.646       High

0 Strain