Gene : AT5G54860 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31585:SF7 - FOLATE-BIOPTERIN TRANSPORTER 4-RELATED Genomic Order:  4946
Name:  ? AT5G54860 Secondary Identifier:  ? PAC:19672384
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G54860 0.5kb upstream 0.5kb upstream 3126 true Chr5: 22284081-22287206 Arabidopsis thaliana
AT5G54860 0.5kb upstream 0.5kb upstream 500 false Chr5: 22284081-22284580 Arabidopsis thaliana
AT5G54860 0.5kb downstream 0.5kb downstream 3126 true Chr5: 22284581-22287706 Arabidopsis thaliana
AT5G54860 0.5kb downstream 0.5kb downstream 500 false Chr5: 22287207-22287706 Arabidopsis thaliana
AT5G54860 1.0kb upstream 1.0kb upstream 3626 true Chr5: 22283581-22287206 Arabidopsis thaliana
AT5G54860 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22283581-22284580 Arabidopsis thaliana
AT5G54860 1.0kb downstream 1.0kb downstream 3626 true Chr5: 22284581-22288206 Arabidopsis thaliana
AT5G54860 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22287207-22288206 Arabidopsis thaliana
AT5G54860 2.0kb upstream 2.0kb upstream 4626 true Chr5: 22282581-22287206 Arabidopsis thaliana
AT5G54860 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22282581-22284580 Arabidopsis thaliana
AT5G54860 2.0kb downstream 2.0kb downstream 4626 true Chr5: 22284581-22289206 Arabidopsis thaliana
AT5G54860 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22287207-22289206 Arabidopsis thaliana
AT5G54860 5.0kb upstream 5.0kb upstream 7626 true Chr5: 22279581-22287206 Arabidopsis thaliana
AT5G54860 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22279581-22284580 Arabidopsis thaliana
AT5G54860 5.0kb downstream 5.0kb downstream 7626 true Chr5: 22284581-22292206 Arabidopsis thaliana
AT5G54860 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22287207-22292206 Arabidopsis thaliana
AT5G54860 10.0kb upstream 10.0kb upstream 12626 true Chr5: 22274581-22287206 Arabidopsis thaliana
AT5G54860 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22274581-22284580 Arabidopsis thaliana
AT5G54860 10.0kb downstream 10.0kb downstream 12626 true Chr5: 22284581-22297206 Arabidopsis thaliana
AT5G54860 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22287207-22297206 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362262 5261 Brassicaceae View MSA
123829379 5264 Brassicales-Malvales View MSA
124337210 5266 SBM View MSA
124238867 5268 Malvidae View MSA
124066063 5270 Rosid View MSA
123736564 5271 Pentapetalae View MSA
122792928 5272 Eudicot View MSA
122046297 5273 Angiosperm View MSA
121350266 5274 Embryophyte View MSA
123425895 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.587       High
cufflinks 6.22        
cufflinks 6.47        
cufflinks 8.319        
cufflinks 10.882        
cufflinks 7.701        

0 Strain