Gene : AT5G54585 A. thaliana TAIR10
Genomic Order:  4916 Name:  ? AT5G54585
Secondary Identifier:  ? PAC:19669002
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G54585 0.5kb upstream 0.5kb upstream 1653 true Chr5: 22175039-22176691 Arabidopsis thaliana
AT5G54585 0.5kb upstream 0.5kb upstream 500 false Chr5: 22175039-22175538 Arabidopsis thaliana
AT5G54585 0.5kb downstream 0.5kb downstream 1653 true Chr5: 22175539-22177191 Arabidopsis thaliana
AT5G54585 0.5kb downstream 0.5kb downstream 500 false Chr5: 22176692-22177191 Arabidopsis thaliana
AT5G54585 1.0kb upstream 1.0kb upstream 2153 true Chr5: 22174539-22176691 Arabidopsis thaliana
AT5G54585 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22174539-22175538 Arabidopsis thaliana
AT5G54585 1.0kb downstream 1.0kb downstream 2153 true Chr5: 22175539-22177691 Arabidopsis thaliana
AT5G54585 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22176692-22177691 Arabidopsis thaliana
AT5G54585 2.0kb upstream 2.0kb upstream 3153 true Chr5: 22173539-22176691 Arabidopsis thaliana
AT5G54585 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22173539-22175538 Arabidopsis thaliana
AT5G54585 2.0kb downstream 2.0kb downstream 3153 true Chr5: 22175539-22178691 Arabidopsis thaliana
AT5G54585 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22176692-22178691 Arabidopsis thaliana
AT5G54585 5.0kb upstream 5.0kb upstream 6153 true Chr5: 22170539-22176691 Arabidopsis thaliana
AT5G54585 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22170539-22175538 Arabidopsis thaliana
AT5G54585 5.0kb downstream 5.0kb downstream 6153 true Chr5: 22175539-22181691 Arabidopsis thaliana
AT5G54585 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22176692-22181691 Arabidopsis thaliana
AT5G54585 10.0kb upstream 10.0kb upstream 11153 true Chr5: 22165539-22176691 Arabidopsis thaliana
AT5G54585 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22165539-22175538 Arabidopsis thaliana
AT5G54585 10.0kb downstream 10.0kb downstream 11153 true Chr5: 22175539-22186691 Arabidopsis thaliana
AT5G54585 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22176692-22186691 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027930 5273 Angiosperm View MSA
122371166 5261 Brassicaceae View MSA
123832828 5264 Brassicales-Malvales View MSA
124350254 5266 SBM View MSA
124242547 5268 Malvidae View MSA
124068301 5270 Rosid View MSA
123752327 5271 Pentapetalae View MSA
122796445 5272 Eudicot View MSA
121297501 5274 Embryophyte View MSA
123335552 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34        
cufflinks 1.282        
cufflinks 1.589        
cufflinks 2.11       High
cufflinks 1.666        
cufflinks 1.079       Low

0 Strain