Gene : ANK A. thaliana TAIR10
Primary Identifier:  ? AT5G54610 Defline:  (1 of 1) PF13637//PF13857 - Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5)
Genomic Order:  4919 Name:  ? AT5G54610
Secondary Identifier:  ? PAC:19665399
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G54610 0.5kb upstream 0.5kb upstream 2247 true Chr5: 22184779-22187025 Arabidopsis thaliana
AT5G54610 0.5kb upstream 0.5kb upstream 500 false Chr5: 22186526-22187025 Arabidopsis thaliana
AT5G54610 0.5kb downstream 0.5kb downstream 2247 true Chr5: 22184279-22186525 Arabidopsis thaliana
AT5G54610 0.5kb downstream 0.5kb downstream 500 false Chr5: 22184279-22184778 Arabidopsis thaliana
AT5G54610 1.0kb upstream 1.0kb upstream 2747 true Chr5: 22184779-22187525 Arabidopsis thaliana
AT5G54610 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22186526-22187525 Arabidopsis thaliana
AT5G54610 1.0kb downstream 1.0kb downstream 2747 true Chr5: 22183779-22186525 Arabidopsis thaliana
AT5G54610 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22183779-22184778 Arabidopsis thaliana
AT5G54610 2.0kb upstream 2.0kb upstream 3747 true Chr5: 22184779-22188525 Arabidopsis thaliana
AT5G54610 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22186526-22188525 Arabidopsis thaliana
AT5G54610 2.0kb downstream 2.0kb downstream 3747 true Chr5: 22182779-22186525 Arabidopsis thaliana
AT5G54610 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22182779-22184778 Arabidopsis thaliana
AT5G54610 5.0kb upstream 5.0kb upstream 6747 true Chr5: 22184779-22191525 Arabidopsis thaliana
AT5G54610 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22186526-22191525 Arabidopsis thaliana
AT5G54610 5.0kb downstream 5.0kb downstream 6747 true Chr5: 22179779-22186525 Arabidopsis thaliana
AT5G54610 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22179779-22184778 Arabidopsis thaliana
AT5G54610 10.0kb upstream 10.0kb upstream 11747 true Chr5: 22184779-22196525 Arabidopsis thaliana
AT5G54610 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22186526-22196525 Arabidopsis thaliana
AT5G54610 10.0kb downstream 10.0kb downstream 11747 true Chr5: 22174779-22186525 Arabidopsis thaliana
AT5G54610 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22174779-22184778 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363027 5261 Brassicaceae View MSA
123838838 5264 Brassicales-Malvales View MSA
124351446 5266 SBM View MSA
124249893 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.725     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.886        
cufflinks 0.009     Low Low
cufflinks 16.74        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain