Gene : AT5G54600 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12903:SF1 - 50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC Genomic Order:  4918
Name:  ? AT5G54600 Secondary Identifier:  ? PAC:19672774
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G54600 0.5kb upstream 0.5kb upstream 2090 true Chr5: 22182478-22184567 Arabidopsis thaliana
AT5G54600 0.5kb upstream 0.5kb upstream 500 false Chr5: 22182478-22182977 Arabidopsis thaliana
AT5G54600 0.5kb downstream 0.5kb downstream 2090 true Chr5: 22182978-22185067 Arabidopsis thaliana
AT5G54600 0.5kb downstream 0.5kb downstream 500 false Chr5: 22184568-22185067 Arabidopsis thaliana
AT5G54600 1.0kb upstream 1.0kb upstream 2590 true Chr5: 22181978-22184567 Arabidopsis thaliana
AT5G54600 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22181978-22182977 Arabidopsis thaliana
AT5G54600 1.0kb downstream 1.0kb downstream 2590 true Chr5: 22182978-22185567 Arabidopsis thaliana
AT5G54600 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22184568-22185567 Arabidopsis thaliana
AT5G54600 2.0kb upstream 2.0kb upstream 3590 true Chr5: 22180978-22184567 Arabidopsis thaliana
AT5G54600 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22180978-22182977 Arabidopsis thaliana
AT5G54600 2.0kb downstream 2.0kb downstream 3590 true Chr5: 22182978-22186567 Arabidopsis thaliana
AT5G54600 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22184568-22186567 Arabidopsis thaliana
AT5G54600 5.0kb upstream 5.0kb upstream 6590 true Chr5: 22177978-22184567 Arabidopsis thaliana
AT5G54600 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22177978-22182977 Arabidopsis thaliana
AT5G54600 5.0kb downstream 5.0kb downstream 6590 true Chr5: 22182978-22189567 Arabidopsis thaliana
AT5G54600 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22184568-22189567 Arabidopsis thaliana
AT5G54600 10.0kb upstream 10.0kb upstream 11590 true Chr5: 22172978-22184567 Arabidopsis thaliana
AT5G54600 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22172978-22182977 Arabidopsis thaliana
AT5G54600 10.0kb downstream 10.0kb downstream 11590 true Chr5: 22182978-22194567 Arabidopsis thaliana
AT5G54600 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22184568-22194567 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361516 5261 Brassicaceae View MSA
123839705 5264 Brassicales-Malvales View MSA
124342411 5266 SBM View MSA
124244383 5268 Malvidae View MSA
124064629 5270 Rosid View MSA
123738046 5271 Pentapetalae View MSA
122791354 5272 Eudicot View MSA
122043380 5273 Angiosperm View MSA
121346422 5274 Embryophyte View MSA
123426364 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.934     High  
cufflinks 6.277        
cufflinks 121.857     High High
cufflinks 6.45        
cufflinks 90.112     High  
cufflinks 5.487        

0 Strain