Gene : AT5G54480 A. thaliana TAIR10
Defline:  (1 of 15) PF04782//PF04783 - Protein of unknown function (DUF632) (DUF632) // Protein of unknown function (DUF630) (DUF630) Genomic Order:  4904
Name:  ? AT5G54480 Secondary Identifier:  ? PAC:19669473
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G54480 0.5kb upstream 0.5kb upstream 2663 true Chr5: 22117504-22120166 Arabidopsis thaliana
AT5G54480 0.5kb upstream 0.5kb upstream 500 false Chr5: 22117504-22118003 Arabidopsis thaliana
AT5G54480 0.5kb downstream 0.5kb downstream 2663 true Chr5: 22118004-22120666 Arabidopsis thaliana
AT5G54480 0.5kb downstream 0.5kb downstream 500 false Chr5: 22120167-22120666 Arabidopsis thaliana
AT5G54480 1.0kb upstream 1.0kb upstream 3163 true Chr5: 22117004-22120166 Arabidopsis thaliana
AT5G54480 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22117004-22118003 Arabidopsis thaliana
AT5G54480 1.0kb downstream 1.0kb downstream 3163 true Chr5: 22118004-22121166 Arabidopsis thaliana
AT5G54480 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22120167-22121166 Arabidopsis thaliana
AT5G54480 2.0kb upstream 2.0kb upstream 4163 true Chr5: 22116004-22120166 Arabidopsis thaliana
AT5G54480 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22116004-22118003 Arabidopsis thaliana
AT5G54480 2.0kb downstream 2.0kb downstream 4163 true Chr5: 22118004-22122166 Arabidopsis thaliana
AT5G54480 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22120167-22122166 Arabidopsis thaliana
AT5G54480 5.0kb upstream 5.0kb upstream 7163 true Chr5: 22113004-22120166 Arabidopsis thaliana
AT5G54480 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22113004-22118003 Arabidopsis thaliana
AT5G54480 5.0kb downstream 5.0kb downstream 7163 true Chr5: 22118004-22125166 Arabidopsis thaliana
AT5G54480 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22120167-22125166 Arabidopsis thaliana
AT5G54480 10.0kb upstream 10.0kb upstream 12163 true Chr5: 22108004-22120166 Arabidopsis thaliana
AT5G54480 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22108004-22118003 Arabidopsis thaliana
AT5G54480 10.0kb downstream 10.0kb downstream 12163 true Chr5: 22118004-22130166 Arabidopsis thaliana
AT5G54480 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22120167-22130166 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369618 5261 Brassicaceae View MSA
123799811 5264 Brassicales-Malvales View MSA
124297295 5266 SBM View MSA
124252480 5268 Malvidae View MSA
124066294 5270 Rosid View MSA
123744998 5271 Pentapetalae View MSA
122791798 5272 Eudicot View MSA
122049285 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain