Gene : AT5G58005 A. thaliana TAIR10
Defline:  (1 of 1) K18179 - cytochrome c oxidase assembly factor 6 (COA6) Genomic Order:  5289
Name:  ? AT5G58005 Secondary Identifier:  ? PAC:19671615
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58005 0.5kb upstream 0.5kb upstream 1479 true Chr5: 23481687-23483165 Arabidopsis thaliana
AT5G58005 0.5kb upstream 0.5kb upstream 500 false Chr5: 23481687-23482186 Arabidopsis thaliana
AT5G58005 0.5kb downstream 0.5kb downstream 1479 true Chr5: 23482187-23483665 Arabidopsis thaliana
AT5G58005 0.5kb downstream 0.5kb downstream 500 false Chr5: 23483166-23483665 Arabidopsis thaliana
AT5G58005 1.0kb upstream 1.0kb upstream 1979 true Chr5: 23481187-23483165 Arabidopsis thaliana
AT5G58005 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23481187-23482186 Arabidopsis thaliana
AT5G58005 1.0kb downstream 1.0kb downstream 1979 true Chr5: 23482187-23484165 Arabidopsis thaliana
AT5G58005 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23483166-23484165 Arabidopsis thaliana
AT5G58005 2.0kb upstream 2.0kb upstream 2979 true Chr5: 23480187-23483165 Arabidopsis thaliana
AT5G58005 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23480187-23482186 Arabidopsis thaliana
AT5G58005 2.0kb downstream 2.0kb downstream 2979 true Chr5: 23482187-23485165 Arabidopsis thaliana
AT5G58005 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23483166-23485165 Arabidopsis thaliana
AT5G58005 5.0kb upstream 5.0kb upstream 5979 true Chr5: 23477187-23483165 Arabidopsis thaliana
AT5G58005 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23477187-23482186 Arabidopsis thaliana
AT5G58005 5.0kb downstream 5.0kb downstream 5979 true Chr5: 23482187-23488165 Arabidopsis thaliana
AT5G58005 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23483166-23488165 Arabidopsis thaliana
AT5G58005 10.0kb upstream 10.0kb upstream 10979 true Chr5: 23472187-23483165 Arabidopsis thaliana
AT5G58005 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23472187-23482186 Arabidopsis thaliana
AT5G58005 10.0kb downstream 10.0kb downstream 10979 true Chr5: 23482187-23493165 Arabidopsis thaliana
AT5G58005 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23483166-23493165 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368298 5261 Brassicaceae View MSA
123831747 5264 Brassicales-Malvales View MSA
124336525 5266 SBM View MSA
124239155 5268 Malvidae View MSA
124064279 5270 Rosid View MSA
123737563 5271 Pentapetalae View MSA
122793935 5272 Eudicot View MSA
122042745 5273 Angiosperm View MSA
121350001 5274 Embryophyte View MSA
123426527 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.209        
cufflinks 10.23        
cufflinks 8.374       Low
cufflinks 10.25        
cufflinks 8.159       Low
cufflinks 9.969        

0 Strain