Gene : AT5G57700 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33307//PTHR33307:SF2 - FAMILY NOT NAMED // BNR/ASP-BOX REPEAT FAMILY PROTEIN Genomic Order:  5253
Name:  ? AT5G57700 Secondary Identifier:  ? PAC:19669372
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57700 0.5kb upstream 0.5kb upstream 2769 true Chr5: 23374374-23377142 Arabidopsis thaliana
AT5G57700 0.5kb upstream 0.5kb upstream 500 false Chr5: 23374374-23374873 Arabidopsis thaliana
AT5G57700 0.5kb downstream 0.5kb downstream 2769 true Chr5: 23374874-23377642 Arabidopsis thaliana
AT5G57700 0.5kb downstream 0.5kb downstream 500 false Chr5: 23377143-23377642 Arabidopsis thaliana
AT5G57700 1.0kb upstream 1.0kb upstream 3269 true Chr5: 23373874-23377142 Arabidopsis thaliana
AT5G57700 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23373874-23374873 Arabidopsis thaliana
AT5G57700 1.0kb downstream 1.0kb downstream 3269 true Chr5: 23374874-23378142 Arabidopsis thaliana
AT5G57700 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23377143-23378142 Arabidopsis thaliana
AT5G57700 2.0kb upstream 2.0kb upstream 4269 true Chr5: 23372874-23377142 Arabidopsis thaliana
AT5G57700 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23372874-23374873 Arabidopsis thaliana
AT5G57700 2.0kb downstream 2.0kb downstream 4269 true Chr5: 23374874-23379142 Arabidopsis thaliana
AT5G57700 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23377143-23379142 Arabidopsis thaliana
AT5G57700 5.0kb upstream 5.0kb upstream 7269 true Chr5: 23369874-23377142 Arabidopsis thaliana
AT5G57700 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23369874-23374873 Arabidopsis thaliana
AT5G57700 5.0kb downstream 5.0kb downstream 7269 true Chr5: 23374874-23382142 Arabidopsis thaliana
AT5G57700 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23377143-23382142 Arabidopsis thaliana
AT5G57700 10.0kb upstream 10.0kb upstream 12269 true Chr5: 23364874-23377142 Arabidopsis thaliana
AT5G57700 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23364874-23374873 Arabidopsis thaliana
AT5G57700 10.0kb downstream 10.0kb downstream 12269 true Chr5: 23374874-23387142 Arabidopsis thaliana
AT5G57700 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23377143-23387142 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364254 5261 Brassicaceae View MSA
123836471 5264 Brassicales-Malvales View MSA
124345251 5266 SBM View MSA
124242299 5268 Malvidae View MSA
124050154 5270 Rosid View MSA
123741218 5271 Pentapetalae View MSA
122786706 5272 Eudicot View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.388        
cufflinks 3.37        
cufflinks 1.743        
cufflinks 3.411        
cufflinks 1.35       Low
cufflinks 3.951       High

0 Strain