Gene : AT5G57710 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11638//PTHR11638:SF94 - ATP-DEPENDENT CLP PROTEASE // HEAT SHOCK PROTEIN 104 Genomic Order:  5254
Name:  ? AT5G57710 Secondary Identifier:  ? PAC:19669955
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57710 0.5kb upstream 0.5kb upstream 4060 true Chr5: 23384294-23388353 Arabidopsis thaliana
AT5G57710 0.5kb upstream 0.5kb upstream 500 false Chr5: 23384294-23384793 Arabidopsis thaliana
AT5G57710 0.5kb downstream 0.5kb downstream 4060 true Chr5: 23384794-23388853 Arabidopsis thaliana
AT5G57710 0.5kb downstream 0.5kb downstream 500 false Chr5: 23388354-23388853 Arabidopsis thaliana
AT5G57710 1.0kb upstream 1.0kb upstream 4560 true Chr5: 23383794-23388353 Arabidopsis thaliana
AT5G57710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23383794-23384793 Arabidopsis thaliana
AT5G57710 1.0kb downstream 1.0kb downstream 4560 true Chr5: 23384794-23389353 Arabidopsis thaliana
AT5G57710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23388354-23389353 Arabidopsis thaliana
AT5G57710 2.0kb upstream 2.0kb upstream 5560 true Chr5: 23382794-23388353 Arabidopsis thaliana
AT5G57710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23382794-23384793 Arabidopsis thaliana
AT5G57710 2.0kb downstream 2.0kb downstream 5560 true Chr5: 23384794-23390353 Arabidopsis thaliana
AT5G57710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23388354-23390353 Arabidopsis thaliana
AT5G57710 5.0kb upstream 5.0kb upstream 8560 true Chr5: 23379794-23388353 Arabidopsis thaliana
AT5G57710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23379794-23384793 Arabidopsis thaliana
AT5G57710 5.0kb downstream 5.0kb downstream 8560 true Chr5: 23384794-23393353 Arabidopsis thaliana
AT5G57710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23388354-23393353 Arabidopsis thaliana
AT5G57710 10.0kb upstream 10.0kb upstream 13560 true Chr5: 23374794-23388353 Arabidopsis thaliana
AT5G57710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23374794-23384793 Arabidopsis thaliana
AT5G57710 10.0kb downstream 10.0kb downstream 13560 true Chr5: 23384794-23398353 Arabidopsis thaliana
AT5G57710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23388354-23398353 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374193 5261 Brassicaceae View MSA
123829468 5264 Brassicales-Malvales View MSA
124343341 5266 SBM View MSA
124250616 5268 Malvidae View MSA
124065969 5270 Rosid View MSA
123749745 5271 Pentapetalae View MSA
122792327 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.885     High High
cufflinks 5.623       Low
cufflinks 45.836     High  
cufflinks 7.929        
cufflinks 44.155     High  
cufflinks 5.563       Low

0 Strain