Gene : AT5G57410 A. thaliana TAIR10
Defline:  (1 of 1) K06085 - synovial sarcoma, X breakpoint 2 interacting protein (SSX2IP, ADIP) Genomic Order:  5222
Name:  ? AT5G57410 Secondary Identifier:  ? PAC:19671787
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57410 0.5kb upstream 0.5kb upstream 4070 true Chr5: 23264314-23268383 Arabidopsis thaliana
AT5G57410 0.5kb upstream 0.5kb upstream 500 false Chr5: 23267884-23268383 Arabidopsis thaliana
AT5G57410 0.5kb downstream 0.5kb downstream 4070 true Chr5: 23263814-23267883 Arabidopsis thaliana
AT5G57410 0.5kb downstream 0.5kb downstream 500 false Chr5: 23263814-23264313 Arabidopsis thaliana
AT5G57410 1.0kb upstream 1.0kb upstream 4570 true Chr5: 23264314-23268883 Arabidopsis thaliana
AT5G57410 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23267884-23268883 Arabidopsis thaliana
AT5G57410 1.0kb downstream 1.0kb downstream 4570 true Chr5: 23263314-23267883 Arabidopsis thaliana
AT5G57410 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23263314-23264313 Arabidopsis thaliana
AT5G57410 2.0kb upstream 2.0kb upstream 5570 true Chr5: 23264314-23269883 Arabidopsis thaliana
AT5G57410 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23267884-23269883 Arabidopsis thaliana
AT5G57410 2.0kb downstream 2.0kb downstream 5570 true Chr5: 23262314-23267883 Arabidopsis thaliana
AT5G57410 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23262314-23264313 Arabidopsis thaliana
AT5G57410 5.0kb upstream 5.0kb upstream 8570 true Chr5: 23264314-23272883 Arabidopsis thaliana
AT5G57410 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23267884-23272883 Arabidopsis thaliana
AT5G57410 5.0kb downstream 5.0kb downstream 8570 true Chr5: 23259314-23267883 Arabidopsis thaliana
AT5G57410 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23259314-23264313 Arabidopsis thaliana
AT5G57410 10.0kb upstream 10.0kb upstream 13570 true Chr5: 23264314-23277883 Arabidopsis thaliana
AT5G57410 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23267884-23277883 Arabidopsis thaliana
AT5G57410 10.0kb downstream 10.0kb downstream 13570 true Chr5: 23254314-23267883 Arabidopsis thaliana
AT5G57410 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23254314-23264313 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369743 5261 Brassicaceae View MSA
123830243 5264 Brassicales-Malvales View MSA
124345833 5266 SBM View MSA
124247938 5268 Malvidae View MSA
124065967 5270 Rosid View MSA
123745771 5271 Pentapetalae View MSA
122786516 5272 Eudicot View MSA
122043605 5273 Angiosperm View MSA
121344783 5274 Embryophyte View MSA
123426997 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.976        
cufflinks 4.575        
cufflinks 0.726        
cufflinks 4.245        
cufflinks 0.661       Low
cufflinks 4.798        

0 Strain