Gene : XRCC3 A. thaliana TAIR10
Primary Identifier:  ? AT5G57450 Defline:  (1 of 1) K10880 - DNA-repair protein XRCC3 (XRCC3)
Genomic Order:  5225 Name:  ? AT5G57450
Secondary Identifier:  ? PAC:19669823
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57450 0.5kb upstream 0.5kb upstream 2384 true Chr5: 23273093-23275476 Arabidopsis thaliana
AT5G57450 0.5kb upstream 0.5kb upstream 500 false Chr5: 23274977-23275476 Arabidopsis thaliana
AT5G57450 0.5kb downstream 0.5kb downstream 2384 true Chr5: 23272593-23274976 Arabidopsis thaliana
AT5G57450 0.5kb downstream 0.5kb downstream 500 false Chr5: 23272593-23273092 Arabidopsis thaliana
AT5G57450 1.0kb upstream 1.0kb upstream 2884 true Chr5: 23273093-23275976 Arabidopsis thaliana
AT5G57450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23274977-23275976 Arabidopsis thaliana
AT5G57450 1.0kb downstream 1.0kb downstream 2884 true Chr5: 23272093-23274976 Arabidopsis thaliana
AT5G57450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23272093-23273092 Arabidopsis thaliana
AT5G57450 2.0kb upstream 2.0kb upstream 3884 true Chr5: 23273093-23276976 Arabidopsis thaliana
AT5G57450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23274977-23276976 Arabidopsis thaliana
AT5G57450 2.0kb downstream 2.0kb downstream 3884 true Chr5: 23271093-23274976 Arabidopsis thaliana
AT5G57450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23271093-23273092 Arabidopsis thaliana
AT5G57450 5.0kb upstream 5.0kb upstream 6884 true Chr5: 23273093-23279976 Arabidopsis thaliana
AT5G57450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23274977-23279976 Arabidopsis thaliana
AT5G57450 5.0kb downstream 5.0kb downstream 6884 true Chr5: 23268093-23274976 Arabidopsis thaliana
AT5G57450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23268093-23273092 Arabidopsis thaliana
AT5G57450 10.0kb upstream 10.0kb upstream 11884 true Chr5: 23273093-23284976 Arabidopsis thaliana
AT5G57450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23274977-23284976 Arabidopsis thaliana
AT5G57450 10.0kb downstream 10.0kb downstream 11884 true Chr5: 23263093-23274976 Arabidopsis thaliana
AT5G57450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23263093-23273092 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379028 5261 Brassicaceae View MSA
123837091 5264 Brassicales-Malvales View MSA
124347025 5266 SBM View MSA
124246263 5268 Malvidae View MSA
124069391 5270 Rosid View MSA
123741903 5271 Pentapetalae View MSA
122794099 5272 Eudicot View MSA
122048125 5273 Angiosperm View MSA
121349692 5274 Embryophyte View MSA
123425830 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.366        
cufflinks 0.44        
cufflinks 0.298        
cufflinks 0.425        
cufflinks 0.244       Low
cufflinks 0.496       High

0 Strain