Gene : XTH13 A. thaliana TAIR10
Primary Identifier:  ? AT5G57540 Defline:  (1 of 9) PTHR31062//PTHR31062:SF20 - FAMILY NOT NAMED // XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 14-RELATED
Genomic Order:  5234 Name:  ? AT5G57540
Secondary Identifier:  ? PAC:19673117
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57540 0.5kb upstream 0.5kb upstream 1554 true Chr5: 23302996-23304549 Arabidopsis thaliana
AT5G57540 0.5kb upstream 0.5kb upstream 500 false Chr5: 23304050-23304549 Arabidopsis thaliana
AT5G57540 0.5kb downstream 0.5kb downstream 1554 true Chr5: 23302496-23304049 Arabidopsis thaliana
AT5G57540 0.5kb downstream 0.5kb downstream 500 false Chr5: 23302496-23302995 Arabidopsis thaliana
AT5G57540 1.0kb upstream 1.0kb upstream 2054 true Chr5: 23302996-23305049 Arabidopsis thaliana
AT5G57540 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23304050-23305049 Arabidopsis thaliana
AT5G57540 1.0kb downstream 1.0kb downstream 2054 true Chr5: 23301996-23304049 Arabidopsis thaliana
AT5G57540 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23301996-23302995 Arabidopsis thaliana
AT5G57540 2.0kb upstream 2.0kb upstream 3054 true Chr5: 23302996-23306049 Arabidopsis thaliana
AT5G57540 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23304050-23306049 Arabidopsis thaliana
AT5G57540 2.0kb downstream 2.0kb downstream 3054 true Chr5: 23300996-23304049 Arabidopsis thaliana
AT5G57540 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23300996-23302995 Arabidopsis thaliana
AT5G57540 5.0kb upstream 5.0kb upstream 6054 true Chr5: 23302996-23309049 Arabidopsis thaliana
AT5G57540 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23304050-23309049 Arabidopsis thaliana
AT5G57540 5.0kb downstream 5.0kb downstream 6054 true Chr5: 23297996-23304049 Arabidopsis thaliana
AT5G57540 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23297996-23302995 Arabidopsis thaliana
AT5G57540 10.0kb upstream 10.0kb upstream 11054 true Chr5: 23302996-23314049 Arabidopsis thaliana
AT5G57540 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23304050-23314049 Arabidopsis thaliana
AT5G57540 10.0kb downstream 10.0kb downstream 11054 true Chr5: 23292996-23304049 Arabidopsis thaliana
AT5G57540 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23292996-23302995 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365477 5261 Brassicaceae View MSA
123837927 5264 Brassicales-Malvales View MSA
124350523 5266 SBM View MSA
124248515 5268 Malvidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.144     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.176     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.791       High

0 Strain