Gene : XTH12 A. thaliana TAIR10
Primary Identifier:  ? AT5G57530 Defline:  (1 of 9) PTHR31062//PTHR31062:SF20 - FAMILY NOT NAMED // XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 14-RELATED
Genomic Order:  5232 Name:  ? AT5G57530
Secondary Identifier:  ? PAC:19667883
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57530 0.5kb upstream 0.5kb upstream 1785 true Chr5: 23300321-23302105 Arabidopsis thaliana
AT5G57530 0.5kb upstream 0.5kb upstream 500 false Chr5: 23301606-23302105 Arabidopsis thaliana
AT5G57530 0.5kb downstream 0.5kb downstream 1785 true Chr5: 23299821-23301605 Arabidopsis thaliana
AT5G57530 0.5kb downstream 0.5kb downstream 500 false Chr5: 23299821-23300320 Arabidopsis thaliana
AT5G57530 1.0kb upstream 1.0kb upstream 2285 true Chr5: 23300321-23302605 Arabidopsis thaliana
AT5G57530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23301606-23302605 Arabidopsis thaliana
AT5G57530 1.0kb downstream 1.0kb downstream 2285 true Chr5: 23299321-23301605 Arabidopsis thaliana
AT5G57530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23299321-23300320 Arabidopsis thaliana
AT5G57530 2.0kb upstream 2.0kb upstream 3285 true Chr5: 23300321-23303605 Arabidopsis thaliana
AT5G57530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23301606-23303605 Arabidopsis thaliana
AT5G57530 2.0kb downstream 2.0kb downstream 3285 true Chr5: 23298321-23301605 Arabidopsis thaliana
AT5G57530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23298321-23300320 Arabidopsis thaliana
AT5G57530 5.0kb upstream 5.0kb upstream 6285 true Chr5: 23300321-23306605 Arabidopsis thaliana
AT5G57530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23301606-23306605 Arabidopsis thaliana
AT5G57530 5.0kb downstream 5.0kb downstream 6285 true Chr5: 23295321-23301605 Arabidopsis thaliana
AT5G57530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23295321-23300320 Arabidopsis thaliana
AT5G57530 10.0kb upstream 10.0kb upstream 11285 true Chr5: 23300321-23311605 Arabidopsis thaliana
AT5G57530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23301606-23311605 Arabidopsis thaliana
AT5G57530 10.0kb downstream 10.0kb downstream 11285 true Chr5: 23290321-23301605 Arabidopsis thaliana
AT5G57530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23290321-23300320 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365477 5261 Brassicaceae View MSA
123837927 5264 Brassicales-Malvales View MSA
124350523 5266 SBM View MSA
124248515 5268 Malvidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.189     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.217     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.617       High

0 Strain