Gene : AT5G57250 A. thaliana TAIR10
Defline:  (1 of 4) K17964 - leucine-rich PPR motif-containing protein, mitochondrial (LRPPRC) Genomic Order:  5204
Name:  ? AT5G57250 Secondary Identifier:  ? PAC:19669341
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57250 0.5kb upstream 0.5kb upstream 4192 true Chr5: 23194833-23199024 Arabidopsis thaliana
AT5G57250 0.5kb upstream 0.5kb upstream 500 false Chr5: 23198525-23199024 Arabidopsis thaliana
AT5G57250 0.5kb downstream 0.5kb downstream 4192 true Chr5: 23194333-23198524 Arabidopsis thaliana
AT5G57250 0.5kb downstream 0.5kb downstream 500 false Chr5: 23194333-23194832 Arabidopsis thaliana
AT5G57250 1.0kb upstream 1.0kb upstream 4692 true Chr5: 23194833-23199524 Arabidopsis thaliana
AT5G57250 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23198525-23199524 Arabidopsis thaliana
AT5G57250 1.0kb downstream 1.0kb downstream 4692 true Chr5: 23193833-23198524 Arabidopsis thaliana
AT5G57250 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23193833-23194832 Arabidopsis thaliana
AT5G57250 2.0kb upstream 2.0kb upstream 5692 true Chr5: 23194833-23200524 Arabidopsis thaliana
AT5G57250 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23198525-23200524 Arabidopsis thaliana
AT5G57250 2.0kb downstream 2.0kb downstream 5692 true Chr5: 23192833-23198524 Arabidopsis thaliana
AT5G57250 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23192833-23194832 Arabidopsis thaliana
AT5G57250 5.0kb upstream 5.0kb upstream 8692 true Chr5: 23194833-23203524 Arabidopsis thaliana
AT5G57250 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23198525-23203524 Arabidopsis thaliana
AT5G57250 5.0kb downstream 5.0kb downstream 8692 true Chr5: 23189833-23198524 Arabidopsis thaliana
AT5G57250 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23189833-23194832 Arabidopsis thaliana
AT5G57250 10.0kb upstream 10.0kb upstream 13692 true Chr5: 23194833-23208524 Arabidopsis thaliana
AT5G57250 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23198525-23208524 Arabidopsis thaliana
AT5G57250 10.0kb downstream 10.0kb downstream 13692 true Chr5: 23184833-23198524 Arabidopsis thaliana
AT5G57250 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23184833-23194832 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366948 5261 Brassicaceae View MSA
123829268 5264 Brassicales-Malvales View MSA
124350645 5266 SBM View MSA
124237381 5268 Malvidae View MSA
124066554 5270 Rosid View MSA
123736416 5271 Pentapetalae View MSA
122796728 5272 Eudicot View MSA
122045085 5273 Angiosperm View MSA
121310395 5274 Embryophyte View MSA
123347889 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.46        
cufflinks 4.466        
cufflinks 3.376       Low
cufflinks 4.772        
cufflinks 3.355       Low
cufflinks 4.8        

0 Strain