Gene : AT5G57210 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22957//PTHR22957:SF274 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  5200
Name:  ? AT5G57210 Secondary Identifier:  ? PAC:19667554
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57210 0.5kb upstream 0.5kb upstream 3479 true Chr5: 23180833-23184311 Arabidopsis thaliana
AT5G57210 0.5kb upstream 0.5kb upstream 500 false Chr5: 23183812-23184311 Arabidopsis thaliana
AT5G57210 0.5kb downstream 0.5kb downstream 3479 true Chr5: 23180333-23183811 Arabidopsis thaliana
AT5G57210 0.5kb downstream 0.5kb downstream 500 false Chr5: 23180333-23180832 Arabidopsis thaliana
AT5G57210 1.0kb upstream 1.0kb upstream 3979 true Chr5: 23180833-23184811 Arabidopsis thaliana
AT5G57210 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23183812-23184811 Arabidopsis thaliana
AT5G57210 1.0kb downstream 1.0kb downstream 3979 true Chr5: 23179833-23183811 Arabidopsis thaliana
AT5G57210 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23179833-23180832 Arabidopsis thaliana
AT5G57210 2.0kb upstream 2.0kb upstream 4979 true Chr5: 23180833-23185811 Arabidopsis thaliana
AT5G57210 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23183812-23185811 Arabidopsis thaliana
AT5G57210 2.0kb downstream 2.0kb downstream 4979 true Chr5: 23178833-23183811 Arabidopsis thaliana
AT5G57210 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23178833-23180832 Arabidopsis thaliana
AT5G57210 5.0kb upstream 5.0kb upstream 7979 true Chr5: 23180833-23188811 Arabidopsis thaliana
AT5G57210 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23183812-23188811 Arabidopsis thaliana
AT5G57210 5.0kb downstream 5.0kb downstream 7979 true Chr5: 23175833-23183811 Arabidopsis thaliana
AT5G57210 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23175833-23180832 Arabidopsis thaliana
AT5G57210 10.0kb upstream 10.0kb upstream 12979 true Chr5: 23180833-23193811 Arabidopsis thaliana
AT5G57210 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23183812-23193811 Arabidopsis thaliana
AT5G57210 10.0kb downstream 10.0kb downstream 12979 true Chr5: 23170833-23183811 Arabidopsis thaliana
AT5G57210 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23170833-23180832 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371086 5261 Brassicaceae View MSA
123800099 5264 Brassicales-Malvales View MSA
124297550 5266 SBM View MSA
124251009 5268 Malvidae View MSA
124063811 5270 Rosid View MSA
123743864 5271 Pentapetalae View MSA
122788044 5272 Eudicot View MSA
122042280 5273 Angiosperm View MSA
121350721 5274 Embryophyte View MSA
123428432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.16        
cufflinks 8.376        
cufflinks 4.269       Low
cufflinks 8.115        
cufflinks 4.051       Low
cufflinks 9.513       High

0 Strain