Gene : AT5G57123 A. thaliana TAIR10
Genomic Order:  5190 Name:  ? AT5G57123
Secondary Identifier:  ? PAC:19671102
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57123 0.5kb upstream 0.5kb upstream 1233 true Chr5: 23126922-23128154 Arabidopsis thaliana
AT5G57123 0.5kb upstream 0.5kb upstream 500 false Chr5: 23127655-23128154 Arabidopsis thaliana
AT5G57123 0.5kb downstream 0.5kb downstream 1233 true Chr5: 23126422-23127654 Arabidopsis thaliana
AT5G57123 0.5kb downstream 0.5kb downstream 500 false Chr5: 23126422-23126921 Arabidopsis thaliana
AT5G57123 1.0kb upstream 1.0kb upstream 1733 true Chr5: 23126922-23128654 Arabidopsis thaliana
AT5G57123 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23127655-23128654 Arabidopsis thaliana
AT5G57123 1.0kb downstream 1.0kb downstream 1733 true Chr5: 23125922-23127654 Arabidopsis thaliana
AT5G57123 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23125922-23126921 Arabidopsis thaliana
AT5G57123 2.0kb upstream 2.0kb upstream 2733 true Chr5: 23126922-23129654 Arabidopsis thaliana
AT5G57123 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23127655-23129654 Arabidopsis thaliana
AT5G57123 2.0kb downstream 2.0kb downstream 2733 true Chr5: 23124922-23127654 Arabidopsis thaliana
AT5G57123 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23124922-23126921 Arabidopsis thaliana
AT5G57123 5.0kb upstream 5.0kb upstream 5733 true Chr5: 23126922-23132654 Arabidopsis thaliana
AT5G57123 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23127655-23132654 Arabidopsis thaliana
AT5G57123 5.0kb downstream 5.0kb downstream 5733 true Chr5: 23121922-23127654 Arabidopsis thaliana
AT5G57123 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23121922-23126921 Arabidopsis thaliana
AT5G57123 10.0kb upstream 10.0kb upstream 10733 true Chr5: 23126922-23137654 Arabidopsis thaliana
AT5G57123 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23127655-23137654 Arabidopsis thaliana
AT5G57123 10.0kb downstream 10.0kb downstream 10733 true Chr5: 23116922-23127654 Arabidopsis thaliana
AT5G57123 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23116922-23126921 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124244065 5268 Malvidae View MSA
122376231 5261 Brassicaceae View MSA
123834070 5264 Brassicales-Malvales View MSA
124346877 5266 SBM View MSA
124074706 5270 Rosid View MSA
123747568 5271 Pentapetalae View MSA
122796436 5272 Eudicot View MSA
122046869 5273 Angiosperm View MSA
121346606 5274 Embryophyte View MSA
123380413 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.015       High
cufflinks 0.331     Low Low
cufflinks 2.645        
cufflinks 0.79        
cufflinks 1.848        
cufflinks 0.73        

0 Strain