Gene : EIR1 A. thaliana TAIR10
Primary Identifier:  ? AT5G57090 Defline:  (1 of 1) PTHR31752//PTHR31752:SF4 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER COMPONENT 2
Genomic Order:  5186 Name:  ? AT5G57090
Secondary Identifier:  ? PAC:19666970
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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57090 0.5kb upstream 0.5kb upstream 4543 true Chr5: 23100193-23104735 Arabidopsis thaliana
AT5G57090 0.5kb upstream 0.5kb upstream 500 false Chr5: 23100193-23100692 Arabidopsis thaliana
AT5G57090 0.5kb downstream 0.5kb downstream 4543 true Chr5: 23100693-23105235 Arabidopsis thaliana
AT5G57090 0.5kb downstream 0.5kb downstream 500 false Chr5: 23104736-23105235 Arabidopsis thaliana
AT5G57090 1.0kb upstream 1.0kb upstream 5043 true Chr5: 23099693-23104735 Arabidopsis thaliana
AT5G57090 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23099693-23100692 Arabidopsis thaliana
AT5G57090 1.0kb downstream 1.0kb downstream 5043 true Chr5: 23100693-23105735 Arabidopsis thaliana
AT5G57090 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23104736-23105735 Arabidopsis thaliana
AT5G57090 2.0kb upstream 2.0kb upstream 6043 true Chr5: 23098693-23104735 Arabidopsis thaliana
AT5G57090 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23098693-23100692 Arabidopsis thaliana
AT5G57090 2.0kb downstream 2.0kb downstream 6043 true Chr5: 23100693-23106735 Arabidopsis thaliana
AT5G57090 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23104736-23106735 Arabidopsis thaliana
AT5G57090 5.0kb upstream 5.0kb upstream 9043 true Chr5: 23095693-23104735 Arabidopsis thaliana
AT5G57090 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23095693-23100692 Arabidopsis thaliana
AT5G57090 5.0kb downstream 5.0kb downstream 9043 true Chr5: 23100693-23109735 Arabidopsis thaliana
AT5G57090 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23104736-23109735 Arabidopsis thaliana
AT5G57090 10.0kb upstream 10.0kb upstream 14043 true Chr5: 23090693-23104735 Arabidopsis thaliana
AT5G57090 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23090693-23100692 Arabidopsis thaliana
AT5G57090 10.0kb downstream 10.0kb downstream 14043 true Chr5: 23100693-23114735 Arabidopsis thaliana
AT5G57090 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23104736-23114735 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374380 5261 Brassicaceae View MSA
123839982 5264 Brassicales-Malvales View MSA
124322668 5266 SBM View MSA
124239980 5268 Malvidae View MSA
124063005 5270 Rosid View MSA
123747112 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.029     Low  
cufflinks 3.245        
cufflinks 0.05     Low  
cufflinks 6.668        
cufflinks 0.013     Low Low
cufflinks 6.636        

0 Strain