Gene : AT5G57010 A. thaliana TAIR10
Defline:  calmodulin-binding family protein Genomic Order:  5176
Name:  ? AT5G57010 Secondary Identifier:  ? PAC:19669721
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57010 0.5kb upstream 0.5kb upstream 2876 true Chr5: 23067537-23070412 Arabidopsis thaliana
AT5G57010 0.5kb upstream 0.5kb upstream 500 false Chr5: 23067537-23068036 Arabidopsis thaliana
AT5G57010 0.5kb downstream 0.5kb downstream 2876 true Chr5: 23068037-23070912 Arabidopsis thaliana
AT5G57010 0.5kb downstream 0.5kb downstream 500 false Chr5: 23070413-23070912 Arabidopsis thaliana
AT5G57010 1.0kb upstream 1.0kb upstream 3376 true Chr5: 23067037-23070412 Arabidopsis thaliana
AT5G57010 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23067037-23068036 Arabidopsis thaliana
AT5G57010 1.0kb downstream 1.0kb downstream 3376 true Chr5: 23068037-23071412 Arabidopsis thaliana
AT5G57010 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23070413-23071412 Arabidopsis thaliana
AT5G57010 2.0kb upstream 2.0kb upstream 4376 true Chr5: 23066037-23070412 Arabidopsis thaliana
AT5G57010 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23066037-23068036 Arabidopsis thaliana
AT5G57010 2.0kb downstream 2.0kb downstream 4376 true Chr5: 23068037-23072412 Arabidopsis thaliana
AT5G57010 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23070413-23072412 Arabidopsis thaliana
AT5G57010 5.0kb upstream 5.0kb upstream 7376 true Chr5: 23063037-23070412 Arabidopsis thaliana
AT5G57010 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23063037-23068036 Arabidopsis thaliana
AT5G57010 5.0kb downstream 5.0kb downstream 7376 true Chr5: 23068037-23075412 Arabidopsis thaliana
AT5G57010 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23070413-23075412 Arabidopsis thaliana
AT5G57010 10.0kb upstream 10.0kb upstream 12376 true Chr5: 23058037-23070412 Arabidopsis thaliana
AT5G57010 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23058037-23068036 Arabidopsis thaliana
AT5G57010 10.0kb downstream 10.0kb downstream 12376 true Chr5: 23068037-23080412 Arabidopsis thaliana
AT5G57010 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23070413-23080412 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374412 5261 Brassicaceae View MSA
123839090 5264 Brassicales-Malvales View MSA
124347130 5266 SBM View MSA
124254117 5268 Malvidae View MSA
124069504 5270 Rosid View MSA
123741985 5271 Pentapetalae View MSA
122797259 5272 Eudicot View MSA
122041581 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.156        
cufflinks 59.289     High High
cufflinks 1.485       Low
cufflinks 36.592     High  
cufflinks 1.91       Low
cufflinks 51.019     High  

0 Strain