Gene : BGAL4 A. thaliana TAIR10
Primary Identifier:  ? AT5G56870 Defline:  (1 of 3) PTHR23421//PTHR23421:SF74 - BETA-GALACTOSIDASE RELATED // BETA-GALACTOSIDASE 1
Genomic Order:  5162 Name:  ? AT5G56870
Secondary Identifier:  ? PAC:19665700
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G56870 0.5kb upstream 0.5kb upstream 4954 true Chr5: 23003696-23008649 Arabidopsis thaliana
AT5G56870 0.5kb upstream 0.5kb upstream 500 false Chr5: 23003696-23004195 Arabidopsis thaliana
AT5G56870 0.5kb downstream 0.5kb downstream 4954 true Chr5: 23004196-23009149 Arabidopsis thaliana
AT5G56870 0.5kb downstream 0.5kb downstream 500 false Chr5: 23008650-23009149 Arabidopsis thaliana
AT5G56870 1.0kb upstream 1.0kb upstream 5454 true Chr5: 23003196-23008649 Arabidopsis thaliana
AT5G56870 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23003196-23004195 Arabidopsis thaliana
AT5G56870 1.0kb downstream 1.0kb downstream 5454 true Chr5: 23004196-23009649 Arabidopsis thaliana
AT5G56870 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23008650-23009649 Arabidopsis thaliana
AT5G56870 2.0kb upstream 2.0kb upstream 6454 true Chr5: 23002196-23008649 Arabidopsis thaliana
AT5G56870 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23002196-23004195 Arabidopsis thaliana
AT5G56870 2.0kb downstream 2.0kb downstream 6454 true Chr5: 23004196-23010649 Arabidopsis thaliana
AT5G56870 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23008650-23010649 Arabidopsis thaliana
AT5G56870 5.0kb upstream 5.0kb upstream 9454 true Chr5: 22999196-23008649 Arabidopsis thaliana
AT5G56870 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22999196-23004195 Arabidopsis thaliana
AT5G56870 5.0kb downstream 5.0kb downstream 9454 true Chr5: 23004196-23013649 Arabidopsis thaliana
AT5G56870 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23008650-23013649 Arabidopsis thaliana
AT5G56870 10.0kb upstream 10.0kb upstream 14454 true Chr5: 22994196-23008649 Arabidopsis thaliana
AT5G56870 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22994196-23004195 Arabidopsis thaliana
AT5G56870 10.0kb downstream 10.0kb downstream 14454 true Chr5: 23004196-23018649 Arabidopsis thaliana
AT5G56870 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23008650-23018649 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372556 5261 Brassicaceae View MSA
123840563 5264 Brassicales-Malvales View MSA
124350808 5266 SBM View MSA
124251438 5268 Malvidae View MSA
124070593 5270 Rosid View MSA
123743472 5271 Pentapetalae View MSA
122770672 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.228       Low
cufflinks 10.072        
cufflinks 8.161        
cufflinks 9.779        
cufflinks 18.027       High
cufflinks 8.4        

0 Strain