Gene : AT5G56450 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24089//PTHR24089:SF342 - FAMILY NOT NAMED // PROTEIN R07E3.4 Genomic Order:  5118
Name:  ? AT5G56450 Secondary Identifier:  ? PAC:19667131
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G56450 0.5kb upstream 0.5kb upstream 2054 true Chr5: 22858509-22860562 Arabidopsis thaliana
AT5G56450 0.5kb upstream 0.5kb upstream 500 false Chr5: 22860063-22860562 Arabidopsis thaliana
AT5G56450 0.5kb downstream 0.5kb downstream 2054 true Chr5: 22858009-22860062 Arabidopsis thaliana
AT5G56450 0.5kb downstream 0.5kb downstream 500 false Chr5: 22858009-22858508 Arabidopsis thaliana
AT5G56450 1.0kb upstream 1.0kb upstream 2554 true Chr5: 22858509-22861062 Arabidopsis thaliana
AT5G56450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22860063-22861062 Arabidopsis thaliana
AT5G56450 1.0kb downstream 1.0kb downstream 2554 true Chr5: 22857509-22860062 Arabidopsis thaliana
AT5G56450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22857509-22858508 Arabidopsis thaliana
AT5G56450 2.0kb upstream 2.0kb upstream 3554 true Chr5: 22858509-22862062 Arabidopsis thaliana
AT5G56450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22860063-22862062 Arabidopsis thaliana
AT5G56450 2.0kb downstream 2.0kb downstream 3554 true Chr5: 22856509-22860062 Arabidopsis thaliana
AT5G56450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22856509-22858508 Arabidopsis thaliana
AT5G56450 5.0kb upstream 5.0kb upstream 6554 true Chr5: 22858509-22865062 Arabidopsis thaliana
AT5G56450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22860063-22865062 Arabidopsis thaliana
AT5G56450 5.0kb downstream 5.0kb downstream 6554 true Chr5: 22853509-22860062 Arabidopsis thaliana
AT5G56450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22853509-22858508 Arabidopsis thaliana
AT5G56450 10.0kb upstream 10.0kb upstream 11554 true Chr5: 22858509-22870062 Arabidopsis thaliana
AT5G56450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22860063-22870062 Arabidopsis thaliana
AT5G56450 10.0kb downstream 10.0kb downstream 11554 true Chr5: 22848509-22860062 Arabidopsis thaliana
AT5G56450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22848509-22858508 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360209 5261 Brassicaceae View MSA
123840937 5264 Brassicales-Malvales View MSA
124340002 5266 SBM View MSA
124242516 5268 Malvidae View MSA
124065765 5270 Rosid View MSA
123737630 5271 Pentapetalae View MSA
122792945 5272 Eudicot View MSA
122042720 5273 Angiosperm View MSA
121346256 5274 Embryophyte View MSA
123427851 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.581        
cufflinks 3.812        
cufflinks 3.361        
cufflinks 3.869        
cufflinks 3.067       Low
cufflinks 3.797        

0 Strain