Gene : AT5G59750 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21327//PTHR21327:SF7 - GTP CYCLOHYDROLASE II-RELATED // MONOFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 3, CHLOROPLASTIC Genomic Order:  5470
Name:  ? AT5G59750 Secondary Identifier:  ? PAC:19666580
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana RIBOSYN2-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59750 0.5kb upstream 0.5kb upstream 2768 true Chr5: 24072775-24075542 Arabidopsis thaliana
AT5G59750 0.5kb upstream 0.5kb upstream 500 false Chr5: 24072775-24073274 Arabidopsis thaliana
AT5G59750 0.5kb downstream 0.5kb downstream 2768 true Chr5: 24073275-24076042 Arabidopsis thaliana
AT5G59750 0.5kb downstream 0.5kb downstream 500 false Chr5: 24075543-24076042 Arabidopsis thaliana
AT5G59750 1.0kb upstream 1.0kb upstream 3268 true Chr5: 24072275-24075542 Arabidopsis thaliana
AT5G59750 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24072275-24073274 Arabidopsis thaliana
AT5G59750 1.0kb downstream 1.0kb downstream 3268 true Chr5: 24073275-24076542 Arabidopsis thaliana
AT5G59750 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24075543-24076542 Arabidopsis thaliana
AT5G59750 2.0kb upstream 2.0kb upstream 4268 true Chr5: 24071275-24075542 Arabidopsis thaliana
AT5G59750 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24071275-24073274 Arabidopsis thaliana
AT5G59750 2.0kb downstream 2.0kb downstream 4268 true Chr5: 24073275-24077542 Arabidopsis thaliana
AT5G59750 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24075543-24077542 Arabidopsis thaliana
AT5G59750 5.0kb upstream 5.0kb upstream 7268 true Chr5: 24068275-24075542 Arabidopsis thaliana
AT5G59750 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24068275-24073274 Arabidopsis thaliana
AT5G59750 5.0kb downstream 5.0kb downstream 7268 true Chr5: 24073275-24080542 Arabidopsis thaliana
AT5G59750 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24075543-24080542 Arabidopsis thaliana
AT5G59750 10.0kb upstream 10.0kb upstream 12268 true Chr5: 24063275-24075542 Arabidopsis thaliana
AT5G59750 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24063275-24073274 Arabidopsis thaliana
AT5G59750 10.0kb downstream 10.0kb downstream 12268 true Chr5: 24073275-24085542 Arabidopsis thaliana
AT5G59750 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24075543-24085542 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374066 5261 Brassicaceae View MSA
123830516 5264 Brassicales-Malvales View MSA
124342854 5266 SBM View MSA
124241994 5268 Malvidae View MSA
124062618 5270 Rosid View MSA
123745495 5271 Pentapetalae View MSA
122786383 5272 Eudicot View MSA
122046960 5273 Angiosperm View MSA
121310676 5274 Embryophyte View MSA
123348102 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.11        
cufflinks 0.713       Low
cufflinks 7.726        
cufflinks 0.972        
cufflinks 7.252        
cufflinks 0.754        

0 Strain