Gene : AT5G59760 A. thaliana TAIR10

Defline:  (1 of 3) PTHR33431:SF2 - GB|AAD24366.1 Genomic Order:  5471
Name:  ? AT5G59760 Secondary Identifier:  ? PAC:19670145

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59760 0.5kb upstream 0.5kb upstream 1385 true Chr5: 24075628-24077012 Arabidopsis thaliana
AT5G59760 0.5kb upstream 0.5kb upstream 500 false Chr5: 24076513-24077012 Arabidopsis thaliana
AT5G59760 0.5kb downstream 0.5kb downstream 1385 true Chr5: 24075128-24076512 Arabidopsis thaliana
AT5G59760 0.5kb downstream 0.5kb downstream 500 false Chr5: 24075128-24075627 Arabidopsis thaliana
AT5G59760 1.0kb upstream 1.0kb upstream 1885 true Chr5: 24075628-24077512 Arabidopsis thaliana
AT5G59760 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24076513-24077512 Arabidopsis thaliana
AT5G59760 1.0kb downstream 1.0kb downstream 1885 true Chr5: 24074628-24076512 Arabidopsis thaliana
AT5G59760 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24074628-24075627 Arabidopsis thaliana
AT5G59760 2.0kb upstream 2.0kb upstream 2885 true Chr5: 24075628-24078512 Arabidopsis thaliana
AT5G59760 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24076513-24078512 Arabidopsis thaliana
AT5G59760 2.0kb downstream 2.0kb downstream 2885 true Chr5: 24073628-24076512 Arabidopsis thaliana
AT5G59760 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24073628-24075627 Arabidopsis thaliana
AT5G59760 5.0kb upstream 5.0kb upstream 5885 true Chr5: 24075628-24081512 Arabidopsis thaliana
AT5G59760 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24076513-24081512 Arabidopsis thaliana
AT5G59760 5.0kb downstream 5.0kb downstream 5885 true Chr5: 24070628-24076512 Arabidopsis thaliana
AT5G59760 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24070628-24075627 Arabidopsis thaliana
AT5G59760 10.0kb upstream 10.0kb upstream 10885 true Chr5: 24075628-24086512 Arabidopsis thaliana
AT5G59760 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24076513-24086512 Arabidopsis thaliana
AT5G59760 10.0kb downstream 10.0kb downstream 10885 true Chr5: 24065628-24076512 Arabidopsis thaliana
AT5G59760 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24065628-24075627 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370312 5261 Brassicaceae View MSA
123799937 5264 Brassicales-Malvales View MSA
124297405 5266 SBM View MSA
124149307 5268 Malvidae View MSA
123875137 5270 Rosid View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.111     Low Low
cufflinks 7.836        
cufflinks 0.18     Low  
cufflinks 6.57        
cufflinks 0.316        
cufflinks 6.426        

0 Strain