Gene : RHL41 A. thaliana TAIR10
Primary Identifier:  ? AT5G59820 Defline:  (1 of 4) PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED
Genomic Order:  5477 Name:  ? AT5G59820
Secondary Identifier:  ? PAC:19669477
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59820 0.5kb upstream 0.5kb upstream 1316 true Chr5: 24102472-24103787 Arabidopsis thaliana
AT5G59820 0.5kb upstream 0.5kb upstream 500 false Chr5: 24102472-24102971 Arabidopsis thaliana
AT5G59820 0.5kb downstream 0.5kb downstream 1316 true Chr5: 24102972-24104287 Arabidopsis thaliana
AT5G59820 0.5kb downstream 0.5kb downstream 500 false Chr5: 24103788-24104287 Arabidopsis thaliana
AT5G59820 1.0kb upstream 1.0kb upstream 1816 true Chr5: 24101972-24103787 Arabidopsis thaliana
AT5G59820 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24101972-24102971 Arabidopsis thaliana
AT5G59820 1.0kb downstream 1.0kb downstream 1816 true Chr5: 24102972-24104787 Arabidopsis thaliana
AT5G59820 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24103788-24104787 Arabidopsis thaliana
AT5G59820 2.0kb upstream 2.0kb upstream 2816 true Chr5: 24100972-24103787 Arabidopsis thaliana
AT5G59820 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24100972-24102971 Arabidopsis thaliana
AT5G59820 2.0kb downstream 2.0kb downstream 2816 true Chr5: 24102972-24105787 Arabidopsis thaliana
AT5G59820 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24103788-24105787 Arabidopsis thaliana
AT5G59820 5.0kb upstream 5.0kb upstream 5816 true Chr5: 24097972-24103787 Arabidopsis thaliana
AT5G59820 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24097972-24102971 Arabidopsis thaliana
AT5G59820 5.0kb downstream 5.0kb downstream 5816 true Chr5: 24102972-24108787 Arabidopsis thaliana
AT5G59820 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24103788-24108787 Arabidopsis thaliana
AT5G59820 10.0kb upstream 10.0kb upstream 10816 true Chr5: 24092972-24103787 Arabidopsis thaliana
AT5G59820 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24092972-24102971 Arabidopsis thaliana
AT5G59820 10.0kb downstream 10.0kb downstream 10816 true Chr5: 24102972-24113787 Arabidopsis thaliana
AT5G59820 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24103788-24113787 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372714 5261 Brassicaceae View MSA
123838776 5264 Brassicales-Malvales View MSA
124351487 5266 SBM View MSA
124250734 5268 Malvidae View MSA
124071249 5270 Rosid View MSA
123747694 5271 Pentapetalae View MSA
122796352 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.926       Low
cufflinks 151.267     High  
cufflinks 41.363     High  
cufflinks 154.32     High  
cufflinks 16.159       Low
cufflinks 118.644     High  

0 Strain