Gene : AT5G59400 A. thaliana TAIR10
Genomic Order:  5436 Name:  ? AT5G59400
Secondary Identifier:  ? PAC:19671895
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59400 0.5kb upstream 0.5kb upstream 2471 true Chr5: 23957237-23959707 Arabidopsis thaliana
AT5G59400 0.5kb upstream 0.5kb upstream 500 false Chr5: 23957237-23957736 Arabidopsis thaliana
AT5G59400 0.5kb downstream 0.5kb downstream 2471 true Chr5: 23957737-23960207 Arabidopsis thaliana
AT5G59400 0.5kb downstream 0.5kb downstream 500 false Chr5: 23959708-23960207 Arabidopsis thaliana
AT5G59400 1.0kb upstream 1.0kb upstream 2971 true Chr5: 23956737-23959707 Arabidopsis thaliana
AT5G59400 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23956737-23957736 Arabidopsis thaliana
AT5G59400 1.0kb downstream 1.0kb downstream 2971 true Chr5: 23957737-23960707 Arabidopsis thaliana
AT5G59400 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23959708-23960707 Arabidopsis thaliana
AT5G59400 2.0kb upstream 2.0kb upstream 3971 true Chr5: 23955737-23959707 Arabidopsis thaliana
AT5G59400 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23955737-23957736 Arabidopsis thaliana
AT5G59400 2.0kb downstream 2.0kb downstream 3971 true Chr5: 23957737-23961707 Arabidopsis thaliana
AT5G59400 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23959708-23961707 Arabidopsis thaliana
AT5G59400 5.0kb upstream 5.0kb upstream 6971 true Chr5: 23952737-23959707 Arabidopsis thaliana
AT5G59400 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23952737-23957736 Arabidopsis thaliana
AT5G59400 5.0kb downstream 5.0kb downstream 6971 true Chr5: 23957737-23964707 Arabidopsis thaliana
AT5G59400 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23959708-23964707 Arabidopsis thaliana
AT5G59400 10.0kb upstream 10.0kb upstream 11971 true Chr5: 23947737-23959707 Arabidopsis thaliana
AT5G59400 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23947737-23957736 Arabidopsis thaliana
AT5G59400 10.0kb downstream 10.0kb downstream 11971 true Chr5: 23957737-23969707 Arabidopsis thaliana
AT5G59400 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23959708-23969707 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376075 5261 Brassicaceae View MSA
123830438 5264 Brassicales-Malvales View MSA
124342064 5266 SBM View MSA
124238170 5268 Malvidae View MSA
124067708 5270 Rosid View MSA
123746485 5271 Pentapetalae View MSA
122792199 5272 Eudicot View MSA
122045973 5273 Angiosperm View MSA
121346062 5274 Embryophyte View MSA
123425424 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.431       Low
cufflinks 2.144        
cufflinks 2.436        
cufflinks 1.914        
cufflinks 2.732       High
cufflinks 1.487       Low

0 Strain