Gene : AT5G59230 A. thaliana TAIR10
Defline:  (1 of 3) K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Genomic Order:  5418
Name:  ? AT5G59230 Secondary Identifier:  ? PAC:19670470
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59230 0.5kb upstream 0.5kb upstream 1325 true Chr5: 23901055-23902379 Arabidopsis thaliana
AT5G59230 0.5kb upstream 0.5kb upstream 500 false Chr5: 23901055-23901554 Arabidopsis thaliana
AT5G59230 0.5kb downstream 0.5kb downstream 1325 true Chr5: 23901555-23902879 Arabidopsis thaliana
AT5G59230 0.5kb downstream 0.5kb downstream 500 false Chr5: 23902380-23902879 Arabidopsis thaliana
AT5G59230 1.0kb upstream 1.0kb upstream 1825 true Chr5: 23900555-23902379 Arabidopsis thaliana
AT5G59230 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23900555-23901554 Arabidopsis thaliana
AT5G59230 1.0kb downstream 1.0kb downstream 1825 true Chr5: 23901555-23903379 Arabidopsis thaliana
AT5G59230 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23902380-23903379 Arabidopsis thaliana
AT5G59230 2.0kb upstream 2.0kb upstream 2825 true Chr5: 23899555-23902379 Arabidopsis thaliana
AT5G59230 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23899555-23901554 Arabidopsis thaliana
AT5G59230 2.0kb downstream 2.0kb downstream 2825 true Chr5: 23901555-23904379 Arabidopsis thaliana
AT5G59230 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23902380-23904379 Arabidopsis thaliana
AT5G59230 5.0kb upstream 5.0kb upstream 5825 true Chr5: 23896555-23902379 Arabidopsis thaliana
AT5G59230 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23896555-23901554 Arabidopsis thaliana
AT5G59230 5.0kb downstream 5.0kb downstream 5825 true Chr5: 23901555-23907379 Arabidopsis thaliana
AT5G59230 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23902380-23907379 Arabidopsis thaliana
AT5G59230 10.0kb upstream 10.0kb upstream 10825 true Chr5: 23891555-23902379 Arabidopsis thaliana
AT5G59230 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23891555-23901554 Arabidopsis thaliana
AT5G59230 10.0kb downstream 10.0kb downstream 10825 true Chr5: 23901555-23912379 Arabidopsis thaliana
AT5G59230 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23902380-23912379 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656791 5273 Angiosperm View MSA
122367458 5261 Brassicaceae View MSA
123799357 5264 Brassicales-Malvales View MSA
124296884 5266 SBM View MSA
124148917 5268 Malvidae View MSA
124037342 5270 Rosid View MSA
123610286 5271 Pentapetalae View MSA
122644912 5272 Eudicot View MSA
120928852 5274 Embryophyte View MSA
123426505 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.071     Low  
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  

0 Strain