Gene : AT5G59240 A. thaliana TAIR10

Defline:  (1 of 2) K02995 - small subunit ribosomal protein S8e (RP-S8e, RPS8) Genomic Order:  5419
Name:  ? AT5G59240 Secondary Identifier:  ? PAC:19666588

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59240 0.5kb upstream 0.5kb upstream 1769 true Chr5: 23902465-23904233 Arabidopsis thaliana
AT5G59240 0.5kb upstream 0.5kb upstream 500 false Chr5: 23903734-23904233 Arabidopsis thaliana
AT5G59240 0.5kb downstream 0.5kb downstream 1769 true Chr5: 23901965-23903733 Arabidopsis thaliana
AT5G59240 0.5kb downstream 0.5kb downstream 500 false Chr5: 23901965-23902464 Arabidopsis thaliana
AT5G59240 1.0kb upstream 1.0kb upstream 2269 true Chr5: 23902465-23904733 Arabidopsis thaliana
AT5G59240 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23903734-23904733 Arabidopsis thaliana
AT5G59240 1.0kb downstream 1.0kb downstream 2269 true Chr5: 23901465-23903733 Arabidopsis thaliana
AT5G59240 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23901465-23902464 Arabidopsis thaliana
AT5G59240 2.0kb upstream 2.0kb upstream 3269 true Chr5: 23902465-23905733 Arabidopsis thaliana
AT5G59240 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23903734-23905733 Arabidopsis thaliana
AT5G59240 2.0kb downstream 2.0kb downstream 3269 true Chr5: 23900465-23903733 Arabidopsis thaliana
AT5G59240 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23900465-23902464 Arabidopsis thaliana
AT5G59240 5.0kb upstream 5.0kb upstream 6269 true Chr5: 23902465-23908733 Arabidopsis thaliana
AT5G59240 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23903734-23908733 Arabidopsis thaliana
AT5G59240 5.0kb downstream 5.0kb downstream 6269 true Chr5: 23897465-23903733 Arabidopsis thaliana
AT5G59240 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23897465-23902464 Arabidopsis thaliana
AT5G59240 10.0kb upstream 10.0kb upstream 11269 true Chr5: 23902465-23913733 Arabidopsis thaliana
AT5G59240 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23903734-23913733 Arabidopsis thaliana
AT5G59240 10.0kb downstream 10.0kb downstream 11269 true Chr5: 23892465-23903733 Arabidopsis thaliana
AT5G59240 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23892465-23902464 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343348 5261 Brassicaceae View MSA
123840294 5264 Brassicales-Malvales View MSA
124346908 5266 SBM View MSA
124248958 5268 Malvidae View MSA
124069380 5270 Rosid View MSA
123753102 5271 Pentapetalae View MSA
122794895 5272 Eudicot View MSA
122047330 5273 Angiosperm View MSA
121343984 5274 Embryophyte View MSA
123428186 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.723        
cufflinks 2.563        
cufflinks 0.414       Low
cufflinks 2.554        
cufflinks 0.548        
cufflinks 4.966       High

0 Strain