Gene : TOPP2 A. thaliana TAIR10
Primary Identifier:  ? AT5G59160 Defline:  (1 of 4) PTHR11668//PTHR11668:SF259 - SERINE/THREONINE PROTEIN PHOSPHATASE // SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 2-RELATED
Genomic Order:  5411 Name:  ? AT5G59160
Secondary Identifier:  ? PAC:19668877
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59160 0.5kb upstream 0.5kb upstream 2852 true Chr5: 23878837-23881688 Arabidopsis thaliana
AT5G59160 0.5kb upstream 0.5kb upstream 500 false Chr5: 23878837-23879336 Arabidopsis thaliana
AT5G59160 0.5kb downstream 0.5kb downstream 2852 true Chr5: 23879337-23882188 Arabidopsis thaliana
AT5G59160 0.5kb downstream 0.5kb downstream 500 false Chr5: 23881689-23882188 Arabidopsis thaliana
AT5G59160 1.0kb upstream 1.0kb upstream 3352 true Chr5: 23878337-23881688 Arabidopsis thaliana
AT5G59160 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23878337-23879336 Arabidopsis thaliana
AT5G59160 1.0kb downstream 1.0kb downstream 3352 true Chr5: 23879337-23882688 Arabidopsis thaliana
AT5G59160 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23881689-23882688 Arabidopsis thaliana
AT5G59160 2.0kb upstream 2.0kb upstream 4352 true Chr5: 23877337-23881688 Arabidopsis thaliana
AT5G59160 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23877337-23879336 Arabidopsis thaliana
AT5G59160 2.0kb downstream 2.0kb downstream 4352 true Chr5: 23879337-23883688 Arabidopsis thaliana
AT5G59160 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23881689-23883688 Arabidopsis thaliana
AT5G59160 5.0kb upstream 5.0kb upstream 7352 true Chr5: 23874337-23881688 Arabidopsis thaliana
AT5G59160 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23874337-23879336 Arabidopsis thaliana
AT5G59160 5.0kb downstream 5.0kb downstream 7352 true Chr5: 23879337-23886688 Arabidopsis thaliana
AT5G59160 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23881689-23886688 Arabidopsis thaliana
AT5G59160 10.0kb upstream 10.0kb upstream 12352 true Chr5: 23869337-23881688 Arabidopsis thaliana
AT5G59160 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23869337-23879336 Arabidopsis thaliana
AT5G59160 10.0kb downstream 10.0kb downstream 12352 true Chr5: 23879337-23891688 Arabidopsis thaliana
AT5G59160 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23881689-23891688 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363840 5261 Brassicaceae View MSA
123839583 5264 Brassicales-Malvales View MSA
124350567 5266 SBM View MSA
124250669 5268 Malvidae View MSA
124069239 5270 Rosid View MSA
123751608 5271 Pentapetalae View MSA
122794214 5272 Eudicot View MSA
122051465 5273 Angiosperm View MSA
121347945 5274 Embryophyte View MSA
123424446 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.163        
cufflinks 12.329        
cufflinks 6.919       Low
cufflinks 12.02        
cufflinks 7.107       Low
cufflinks 12.373        

0 Strain