Gene : AT5G59140 A. thaliana TAIR10
Defline:  (1 of 1) K03872 - transcription elongation factor B, polypeptide 1 (TCEB1) Genomic Order:  5409
Name:  ? AT5G59140 Secondary Identifier:  ? PAC:19671119
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59140 0.5kb upstream 0.5kb upstream 1785 true Chr5: 23874411-23876195 Arabidopsis thaliana
AT5G59140 0.5kb upstream 0.5kb upstream 500 false Chr5: 23875696-23876195 Arabidopsis thaliana
AT5G59140 0.5kb downstream 0.5kb downstream 1785 true Chr5: 23873911-23875695 Arabidopsis thaliana
AT5G59140 0.5kb downstream 0.5kb downstream 500 false Chr5: 23873911-23874410 Arabidopsis thaliana
AT5G59140 1.0kb upstream 1.0kb upstream 2285 true Chr5: 23874411-23876695 Arabidopsis thaliana
AT5G59140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23875696-23876695 Arabidopsis thaliana
AT5G59140 1.0kb downstream 1.0kb downstream 2285 true Chr5: 23873411-23875695 Arabidopsis thaliana
AT5G59140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23873411-23874410 Arabidopsis thaliana
AT5G59140 2.0kb upstream 2.0kb upstream 3285 true Chr5: 23874411-23877695 Arabidopsis thaliana
AT5G59140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23875696-23877695 Arabidopsis thaliana
AT5G59140 2.0kb downstream 2.0kb downstream 3285 true Chr5: 23872411-23875695 Arabidopsis thaliana
AT5G59140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23872411-23874410 Arabidopsis thaliana
AT5G59140 5.0kb upstream 5.0kb upstream 6285 true Chr5: 23874411-23880695 Arabidopsis thaliana
AT5G59140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23875696-23880695 Arabidopsis thaliana
AT5G59140 5.0kb downstream 5.0kb downstream 6285 true Chr5: 23869411-23875695 Arabidopsis thaliana
AT5G59140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23869411-23874410 Arabidopsis thaliana
AT5G59140 10.0kb upstream 10.0kb upstream 11285 true Chr5: 23874411-23885695 Arabidopsis thaliana
AT5G59140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23875696-23885695 Arabidopsis thaliana
AT5G59140 10.0kb downstream 10.0kb downstream 11285 true Chr5: 23864411-23875695 Arabidopsis thaliana
AT5G59140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23864411-23874410 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041156 5273 Angiosperm View MSA
122376818 5261 Brassicaceae View MSA
123831906 5264 Brassicales-Malvales View MSA
124341118 5266 SBM View MSA
124239548 5268 Malvidae View MSA
124062400 5270 Rosid View MSA
123740758 5271 Pentapetalae View MSA
122790523 5272 Eudicot View MSA
121349324 5274 Embryophyte View MSA
123423889 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.259        
cufflinks 28.999        
cufflinks 16.903       Low
cufflinks 31.082     High High
cufflinks 20.793        
cufflinks 25.957        

0 Strain