Gene : NRPB7 A. thaliana TAIR10
Primary Identifier:  ? AT5G59180 Defline:  (1 of 1) K03015 - DNA-directed RNA polymerase II subunit RPB7 (RPB7, POLR2G)
Genomic Order:  5413 Name:  ? AT5G59180
Secondary Identifier:  ? PAC:19665614
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59180 0.5kb upstream 0.5kb upstream 2292 true Chr5: 23882917-23885208 Arabidopsis thaliana
AT5G59180 0.5kb upstream 0.5kb upstream 500 false Chr5: 23882917-23883416 Arabidopsis thaliana
AT5G59180 0.5kb downstream 0.5kb downstream 2292 true Chr5: 23883417-23885708 Arabidopsis thaliana
AT5G59180 0.5kb downstream 0.5kb downstream 500 false Chr5: 23885209-23885708 Arabidopsis thaliana
AT5G59180 1.0kb upstream 1.0kb upstream 2792 true Chr5: 23882417-23885208 Arabidopsis thaliana
AT5G59180 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23882417-23883416 Arabidopsis thaliana
AT5G59180 1.0kb downstream 1.0kb downstream 2792 true Chr5: 23883417-23886208 Arabidopsis thaliana
AT5G59180 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23885209-23886208 Arabidopsis thaliana
AT5G59180 2.0kb upstream 2.0kb upstream 3792 true Chr5: 23881417-23885208 Arabidopsis thaliana
AT5G59180 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23881417-23883416 Arabidopsis thaliana
AT5G59180 2.0kb downstream 2.0kb downstream 3792 true Chr5: 23883417-23887208 Arabidopsis thaliana
AT5G59180 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23885209-23887208 Arabidopsis thaliana
AT5G59180 5.0kb upstream 5.0kb upstream 6792 true Chr5: 23878417-23885208 Arabidopsis thaliana
AT5G59180 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23878417-23883416 Arabidopsis thaliana
AT5G59180 5.0kb downstream 5.0kb downstream 6792 true Chr5: 23883417-23890208 Arabidopsis thaliana
AT5G59180 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23885209-23890208 Arabidopsis thaliana
AT5G59180 10.0kb upstream 10.0kb upstream 11792 true Chr5: 23873417-23885208 Arabidopsis thaliana
AT5G59180 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23873417-23883416 Arabidopsis thaliana
AT5G59180 10.0kb downstream 10.0kb downstream 11792 true Chr5: 23883417-23895208 Arabidopsis thaliana
AT5G59180 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23885209-23895208 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375120 5261 Brassicaceae View MSA
123829560 5264 Brassicales-Malvales View MSA
124341340 5266 SBM View MSA
124239705 5268 Malvidae View MSA
124066331 5270 Rosid View MSA
123736511 5271 Pentapetalae View MSA
122789999 5272 Eudicot View MSA
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.296        
cufflinks 8.768        
cufflinks 4.885        
cufflinks 8.776        
cufflinks 4.448       Low
cufflinks 9.478       High

0 Strain