Gene : AT5G58990 A. thaliana TAIR10
Defline:  (1 of 2) PF16053 - Mitochondrial 28S ribosomal protein S34 (MRP-S34) Genomic Order:  5393
Name:  ? AT5G58990 Secondary Identifier:  ? PAC:19667636
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58990 0.5kb upstream 0.5kb upstream 1651 true Chr5: 23814493-23816143 Arabidopsis thaliana
AT5G58990 0.5kb upstream 0.5kb upstream 500 false Chr5: 23814493-23814992 Arabidopsis thaliana
AT5G58990 0.5kb downstream 0.5kb downstream 1651 true Chr5: 23814993-23816643 Arabidopsis thaliana
AT5G58990 0.5kb downstream 0.5kb downstream 500 false Chr5: 23816144-23816643 Arabidopsis thaliana
AT5G58990 1.0kb upstream 1.0kb upstream 2151 true Chr5: 23813993-23816143 Arabidopsis thaliana
AT5G58990 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23813993-23814992 Arabidopsis thaliana
AT5G58990 1.0kb downstream 1.0kb downstream 2151 true Chr5: 23814993-23817143 Arabidopsis thaliana
AT5G58990 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23816144-23817143 Arabidopsis thaliana
AT5G58990 2.0kb upstream 2.0kb upstream 3151 true Chr5: 23812993-23816143 Arabidopsis thaliana
AT5G58990 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23812993-23814992 Arabidopsis thaliana
AT5G58990 2.0kb downstream 2.0kb downstream 3151 true Chr5: 23814993-23818143 Arabidopsis thaliana
AT5G58990 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23816144-23818143 Arabidopsis thaliana
AT5G58990 5.0kb upstream 5.0kb upstream 6151 true Chr5: 23809993-23816143 Arabidopsis thaliana
AT5G58990 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23809993-23814992 Arabidopsis thaliana
AT5G58990 5.0kb downstream 5.0kb downstream 6151 true Chr5: 23814993-23821143 Arabidopsis thaliana
AT5G58990 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23816144-23821143 Arabidopsis thaliana
AT5G58990 10.0kb upstream 10.0kb upstream 11151 true Chr5: 23804993-23816143 Arabidopsis thaliana
AT5G58990 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23804993-23814992 Arabidopsis thaliana
AT5G58990 10.0kb downstream 10.0kb downstream 11151 true Chr5: 23814993-23826143 Arabidopsis thaliana
AT5G58990 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23816144-23826143 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379319 5261 Brassicaceae View MSA
123833765 5264 Brassicales-Malvales View MSA
124338993 5266 SBM View MSA
124241495 5268 Malvidae View MSA
124062726 5270 Rosid View MSA
123743415 5271 Pentapetalae View MSA
122794172 5272 Eudicot View MSA
122043343 5273 Angiosperm View MSA
121350318 5274 Embryophyte View MSA
123423853 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.248        
cufflinks 12.834        
cufflinks 11.394        
cufflinks 13.445        
cufflinks 10.222       Low
cufflinks 15.193       High

0 Strain