Gene : ftsh9 A. thaliana TAIR10
Primary Identifier:  ? AT5G58870 Defline:  (1 of 2) PTHR23076//PTHR23076:SF70 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED
Genomic Order:  5381 Name:  ? AT5G58870
Secondary Identifier:  ? PAC:19667683
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58870 0.5kb upstream 0.5kb upstream 4470 true Chr5: 23769811-23774280 Arabidopsis thaliana
AT5G58870 0.5kb upstream 0.5kb upstream 500 false Chr5: 23773781-23774280 Arabidopsis thaliana
AT5G58870 0.5kb downstream 0.5kb downstream 4470 true Chr5: 23769311-23773780 Arabidopsis thaliana
AT5G58870 0.5kb downstream 0.5kb downstream 500 false Chr5: 23769311-23769810 Arabidopsis thaliana
AT5G58870 1.0kb upstream 1.0kb upstream 4970 true Chr5: 23769811-23774780 Arabidopsis thaliana
AT5G58870 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23773781-23774780 Arabidopsis thaliana
AT5G58870 1.0kb downstream 1.0kb downstream 4970 true Chr5: 23768811-23773780 Arabidopsis thaliana
AT5G58870 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23768811-23769810 Arabidopsis thaliana
AT5G58870 2.0kb upstream 2.0kb upstream 5970 true Chr5: 23769811-23775780 Arabidopsis thaliana
AT5G58870 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23773781-23775780 Arabidopsis thaliana
AT5G58870 2.0kb downstream 2.0kb downstream 5970 true Chr5: 23767811-23773780 Arabidopsis thaliana
AT5G58870 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23767811-23769810 Arabidopsis thaliana
AT5G58870 5.0kb upstream 5.0kb upstream 8970 true Chr5: 23769811-23778780 Arabidopsis thaliana
AT5G58870 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23773781-23778780 Arabidopsis thaliana
AT5G58870 5.0kb downstream 5.0kb downstream 8970 true Chr5: 23764811-23773780 Arabidopsis thaliana
AT5G58870 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23764811-23769810 Arabidopsis thaliana
AT5G58870 10.0kb upstream 10.0kb upstream 13970 true Chr5: 23769811-23783780 Arabidopsis thaliana
AT5G58870 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23773781-23783780 Arabidopsis thaliana
AT5G58870 10.0kb downstream 10.0kb downstream 13970 true Chr5: 23759811-23773780 Arabidopsis thaliana
AT5G58870 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23759811-23769810 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787549 5272 Eudicot View MSA
122364754 5261 Brassicaceae View MSA
123835183 5264 Brassicales-Malvales View MSA
124351521 5266 SBM View MSA
124242131 5268 Malvidae View MSA
124063114 5270 Rosid View MSA
123748057 5271 Pentapetalae View MSA
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.178        
cufflinks 9.265        
cufflinks 16.641        
cufflinks 9.327        
cufflinks 20.49       High
cufflinks 8.042       Low

0 Strain