Gene : AT5G58880 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33870:SF4 - GB Genomic Order:  5382
Name:  ? AT5G58880 Secondary Identifier:  ? PAC:19672800
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58880 0.5kb upstream 0.5kb upstream 4039 true Chr5: 23775466-23779504 Arabidopsis thaliana
AT5G58880 0.5kb upstream 0.5kb upstream 500 false Chr5: 23775466-23775965 Arabidopsis thaliana
AT5G58880 0.5kb downstream 0.5kb downstream 4039 true Chr5: 23775966-23780004 Arabidopsis thaliana
AT5G58880 0.5kb downstream 0.5kb downstream 500 false Chr5: 23779505-23780004 Arabidopsis thaliana
AT5G58880 1.0kb upstream 1.0kb upstream 4539 true Chr5: 23774966-23779504 Arabidopsis thaliana
AT5G58880 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23774966-23775965 Arabidopsis thaliana
AT5G58880 1.0kb downstream 1.0kb downstream 4539 true Chr5: 23775966-23780504 Arabidopsis thaliana
AT5G58880 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23779505-23780504 Arabidopsis thaliana
AT5G58880 2.0kb upstream 2.0kb upstream 5539 true Chr5: 23773966-23779504 Arabidopsis thaliana
AT5G58880 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23773966-23775965 Arabidopsis thaliana
AT5G58880 2.0kb downstream 2.0kb downstream 5539 true Chr5: 23775966-23781504 Arabidopsis thaliana
AT5G58880 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23779505-23781504 Arabidopsis thaliana
AT5G58880 5.0kb upstream 5.0kb upstream 8539 true Chr5: 23770966-23779504 Arabidopsis thaliana
AT5G58880 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23770966-23775965 Arabidopsis thaliana
AT5G58880 5.0kb downstream 5.0kb downstream 8539 true Chr5: 23775966-23784504 Arabidopsis thaliana
AT5G58880 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23779505-23784504 Arabidopsis thaliana
AT5G58880 10.0kb upstream 10.0kb upstream 13539 true Chr5: 23765966-23779504 Arabidopsis thaliana
AT5G58880 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23765966-23775965 Arabidopsis thaliana
AT5G58880 10.0kb downstream 10.0kb downstream 13539 true Chr5: 23775966-23789504 Arabidopsis thaliana
AT5G58880 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23779505-23789504 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124322286 5266 SBM View MSA
122377451 5261 Brassicaceae View MSA
123837319 5264 Brassicales-Malvales View MSA
124253819 5268 Malvidae View MSA
124069776 5270 Rosid View MSA
123749808 5271 Pentapetalae View MSA
122794313 5272 Eudicot View MSA
122043961 5273 Angiosperm View MSA
121310217 5274 Embryophyte View MSA
123347767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain