Gene : AT5G58770 A. thaliana TAIR10
Defline:  (1 of 10) K11778 - ditrans,polycis-polyprenyl diphosphate synthase (DHDDS, RER2, SRT1) Genomic Order:  5369
Name:  ? AT5G58770 Secondary Identifier:  ? PAC:19669052
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58770 0.5kb upstream 0.5kb upstream 1759 true Chr5: 23733876-23735634 Arabidopsis thaliana
AT5G58770 0.5kb upstream 0.5kb upstream 500 false Chr5: 23733876-23734375 Arabidopsis thaliana
AT5G58770 0.5kb downstream 0.5kb downstream 1759 true Chr5: 23734376-23736134 Arabidopsis thaliana
AT5G58770 0.5kb downstream 0.5kb downstream 500 false Chr5: 23735635-23736134 Arabidopsis thaliana
AT5G58770 1.0kb upstream 1.0kb upstream 2259 true Chr5: 23733376-23735634 Arabidopsis thaliana
AT5G58770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23733376-23734375 Arabidopsis thaliana
AT5G58770 1.0kb downstream 1.0kb downstream 2259 true Chr5: 23734376-23736634 Arabidopsis thaliana
AT5G58770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23735635-23736634 Arabidopsis thaliana
AT5G58770 2.0kb upstream 2.0kb upstream 3259 true Chr5: 23732376-23735634 Arabidopsis thaliana
AT5G58770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23732376-23734375 Arabidopsis thaliana
AT5G58770 2.0kb downstream 2.0kb downstream 3259 true Chr5: 23734376-23737634 Arabidopsis thaliana
AT5G58770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23735635-23737634 Arabidopsis thaliana
AT5G58770 5.0kb upstream 5.0kb upstream 6259 true Chr5: 23729376-23735634 Arabidopsis thaliana
AT5G58770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23729376-23734375 Arabidopsis thaliana
AT5G58770 5.0kb downstream 5.0kb downstream 6259 true Chr5: 23734376-23740634 Arabidopsis thaliana
AT5G58770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23735635-23740634 Arabidopsis thaliana
AT5G58770 10.0kb upstream 10.0kb upstream 11259 true Chr5: 23724376-23735634 Arabidopsis thaliana
AT5G58770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23724376-23734375 Arabidopsis thaliana
AT5G58770 10.0kb downstream 10.0kb downstream 11259 true Chr5: 23734376-23745634 Arabidopsis thaliana
AT5G58770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23735635-23745634 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375042 5261 Brassicaceae View MSA
123832786 5264 Brassicales-Malvales View MSA
124348004 5266 SBM View MSA
124237642 5268 Malvidae View MSA
124065300 5270 Rosid View MSA
123753715 5271 Pentapetalae View MSA
122795896 5272 Eudicot View MSA
122049873 5273 Angiosperm View MSA
121349663 5274 Embryophyte View MSA
123426106 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.564       High
cufflinks 3.351        
cufflinks 2.178        
cufflinks 2.227        
cufflinks 2.849        
cufflinks 1.969        

0 Strain