Gene : AT5G58610 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24098//PTHR24098:SF4 - FAMILY NOT NAMED // ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-RELATED Genomic Order:  5353
Name:  ? AT5G58610 Secondary Identifier:  ? PAC:19671490
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58610 0.5kb upstream 0.5kb upstream 4783 true Chr5: 23686771-23691553 Arabidopsis thaliana
AT5G58610 0.5kb upstream 0.5kb upstream 500 false Chr5: 23691054-23691553 Arabidopsis thaliana
AT5G58610 0.5kb downstream 0.5kb downstream 4783 true Chr5: 23686271-23691053 Arabidopsis thaliana
AT5G58610 0.5kb downstream 0.5kb downstream 500 false Chr5: 23686271-23686770 Arabidopsis thaliana
AT5G58610 1.0kb upstream 1.0kb upstream 5283 true Chr5: 23686771-23692053 Arabidopsis thaliana
AT5G58610 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23691054-23692053 Arabidopsis thaliana
AT5G58610 1.0kb downstream 1.0kb downstream 5283 true Chr5: 23685771-23691053 Arabidopsis thaliana
AT5G58610 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23685771-23686770 Arabidopsis thaliana
AT5G58610 2.0kb upstream 2.0kb upstream 6283 true Chr5: 23686771-23693053 Arabidopsis thaliana
AT5G58610 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23691054-23693053 Arabidopsis thaliana
AT5G58610 2.0kb downstream 2.0kb downstream 6283 true Chr5: 23684771-23691053 Arabidopsis thaliana
AT5G58610 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23684771-23686770 Arabidopsis thaliana
AT5G58610 5.0kb upstream 5.0kb upstream 9283 true Chr5: 23686771-23696053 Arabidopsis thaliana
AT5G58610 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23691054-23696053 Arabidopsis thaliana
AT5G58610 5.0kb downstream 5.0kb downstream 9283 true Chr5: 23681771-23691053 Arabidopsis thaliana
AT5G58610 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23681771-23686770 Arabidopsis thaliana
AT5G58610 10.0kb upstream 10.0kb upstream 14283 true Chr5: 23686771-23701053 Arabidopsis thaliana
AT5G58610 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23691054-23701053 Arabidopsis thaliana
AT5G58610 10.0kb downstream 10.0kb downstream 14283 true Chr5: 23676771-23691053 Arabidopsis thaliana
AT5G58610 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23676771-23686770 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364177 5261 Brassicaceae View MSA
123832187 5264 Brassicales-Malvales View MSA
124345630 5266 SBM View MSA
124248675 5268 Malvidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.079     Low  
cufflinks 0.735        
cufflinks 0.038     Low Low
cufflinks 0.643        
cufflinks 0.047     Low  
cufflinks 0.862       High

0 Strain