Gene : ROC7 A. thaliana TAIR10
Primary Identifier:  ? AT5G58710 Defline:  (1 of 3) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED
Genomic Order:  5363 Name:  ? AT5G58710
Secondary Identifier:  ? PAC:19669461
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58710 0.5kb upstream 0.5kb upstream 2491 true Chr5: 23717275-23719765 Arabidopsis thaliana
AT5G58710 0.5kb upstream 0.5kb upstream 500 false Chr5: 23717275-23717774 Arabidopsis thaliana
AT5G58710 0.5kb downstream 0.5kb downstream 2491 true Chr5: 23717775-23720265 Arabidopsis thaliana
AT5G58710 0.5kb downstream 0.5kb downstream 500 false Chr5: 23719766-23720265 Arabidopsis thaliana
AT5G58710 1.0kb upstream 1.0kb upstream 2991 true Chr5: 23716775-23719765 Arabidopsis thaliana
AT5G58710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23716775-23717774 Arabidopsis thaliana
AT5G58710 1.0kb downstream 1.0kb downstream 2991 true Chr5: 23717775-23720765 Arabidopsis thaliana
AT5G58710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23719766-23720765 Arabidopsis thaliana
AT5G58710 2.0kb upstream 2.0kb upstream 3991 true Chr5: 23715775-23719765 Arabidopsis thaliana
AT5G58710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23715775-23717774 Arabidopsis thaliana
AT5G58710 2.0kb downstream 2.0kb downstream 3991 true Chr5: 23717775-23721765 Arabidopsis thaliana
AT5G58710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23719766-23721765 Arabidopsis thaliana
AT5G58710 5.0kb upstream 5.0kb upstream 6991 true Chr5: 23712775-23719765 Arabidopsis thaliana
AT5G58710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23712775-23717774 Arabidopsis thaliana
AT5G58710 5.0kb downstream 5.0kb downstream 6991 true Chr5: 23717775-23724765 Arabidopsis thaliana
AT5G58710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23719766-23724765 Arabidopsis thaliana
AT5G58710 10.0kb upstream 10.0kb upstream 11991 true Chr5: 23707775-23719765 Arabidopsis thaliana
AT5G58710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23707775-23717774 Arabidopsis thaliana
AT5G58710 10.0kb downstream 10.0kb downstream 11991 true Chr5: 23717775-23729765 Arabidopsis thaliana
AT5G58710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23719766-23729765 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371468 5261 Brassicaceae View MSA
123835455 5264 Brassicales-Malvales View MSA
124342562 5266 SBM View MSA
124240718 5268 Malvidae View MSA
124063995 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.289     High  
cufflinks 65.843     High  
cufflinks 35.497     High Low
cufflinks 63.951     High  
cufflinks 36.532     High Low
cufflinks 68.946     High  

0 Strain