Gene : RANBP1 A. thaliana TAIR10
Primary Identifier:  ? AT5G58590 Defline:  (1 of 3) K15306 - Ran-binding protein 1 (RANBP1)
Genomic Order:  5351 Name:  ? AT5G58590
Secondary Identifier:  ? PAC:19667999
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58590 0.5kb upstream 0.5kb upstream 2220 true Chr5: 23680079-23682298 Arabidopsis thaliana
AT5G58590 0.5kb upstream 0.5kb upstream 500 false Chr5: 23681799-23682298 Arabidopsis thaliana
AT5G58590 0.5kb downstream 0.5kb downstream 2220 true Chr5: 23679579-23681798 Arabidopsis thaliana
AT5G58590 0.5kb downstream 0.5kb downstream 500 false Chr5: 23679579-23680078 Arabidopsis thaliana
AT5G58590 1.0kb upstream 1.0kb upstream 2720 true Chr5: 23680079-23682798 Arabidopsis thaliana
AT5G58590 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23681799-23682798 Arabidopsis thaliana
AT5G58590 1.0kb downstream 1.0kb downstream 2720 true Chr5: 23679079-23681798 Arabidopsis thaliana
AT5G58590 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23679079-23680078 Arabidopsis thaliana
AT5G58590 2.0kb upstream 2.0kb upstream 3720 true Chr5: 23680079-23683798 Arabidopsis thaliana
AT5G58590 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23681799-23683798 Arabidopsis thaliana
AT5G58590 2.0kb downstream 2.0kb downstream 3720 true Chr5: 23678079-23681798 Arabidopsis thaliana
AT5G58590 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23678079-23680078 Arabidopsis thaliana
AT5G58590 5.0kb upstream 5.0kb upstream 6720 true Chr5: 23680079-23686798 Arabidopsis thaliana
AT5G58590 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23681799-23686798 Arabidopsis thaliana
AT5G58590 5.0kb downstream 5.0kb downstream 6720 true Chr5: 23675079-23681798 Arabidopsis thaliana
AT5G58590 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23675079-23680078 Arabidopsis thaliana
AT5G58590 10.0kb upstream 10.0kb upstream 11720 true Chr5: 23680079-23691798 Arabidopsis thaliana
AT5G58590 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23681799-23691798 Arabidopsis thaliana
AT5G58590 10.0kb downstream 10.0kb downstream 11720 true Chr5: 23670079-23681798 Arabidopsis thaliana
AT5G58590 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23670079-23680078 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377615 5261 Brassicaceae View MSA
123801582 5264 Brassicales-Malvales View MSA
124298865 5266 SBM View MSA
124248716 5268 Malvidae View MSA
124061398 5270 Rosid View MSA
123750173 5271 Pentapetalae View MSA
122790979 5272 Eudicot View MSA
122044906 5273 Angiosperm View MSA
121343818 5274 Embryophyte View MSA
123427717 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.011        
cufflinks 25.961        
cufflinks 13.534        
cufflinks 30.199       High
cufflinks 12.614       Low
cufflinks 27.502        

0 Strain