Gene : AT5G58375 A. thaliana TAIR10
Defline:  Methyltransferase-related protein Genomic Order:  5327
Name:  ? AT5G58375 Secondary Identifier:  ? PAC:19669061
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58375 0.5kb upstream 0.5kb upstream 1189 true Chr5: 23595772-23596960 Arabidopsis thaliana
AT5G58375 0.5kb upstream 0.5kb upstream 500 false Chr5: 23595772-23596271 Arabidopsis thaliana
AT5G58375 0.5kb downstream 0.5kb downstream 1189 true Chr5: 23596272-23597460 Arabidopsis thaliana
AT5G58375 0.5kb downstream 0.5kb downstream 500 false Chr5: 23596961-23597460 Arabidopsis thaliana
AT5G58375 1.0kb upstream 1.0kb upstream 1689 true Chr5: 23595272-23596960 Arabidopsis thaliana
AT5G58375 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23595272-23596271 Arabidopsis thaliana
AT5G58375 1.0kb downstream 1.0kb downstream 1689 true Chr5: 23596272-23597960 Arabidopsis thaliana
AT5G58375 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23596961-23597960 Arabidopsis thaliana
AT5G58375 2.0kb upstream 2.0kb upstream 2689 true Chr5: 23594272-23596960 Arabidopsis thaliana
AT5G58375 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23594272-23596271 Arabidopsis thaliana
AT5G58375 2.0kb downstream 2.0kb downstream 2689 true Chr5: 23596272-23598960 Arabidopsis thaliana
AT5G58375 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23596961-23598960 Arabidopsis thaliana
AT5G58375 5.0kb upstream 5.0kb upstream 5689 true Chr5: 23591272-23596960 Arabidopsis thaliana
AT5G58375 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23591272-23596271 Arabidopsis thaliana
AT5G58375 5.0kb downstream 5.0kb downstream 5689 true Chr5: 23596272-23601960 Arabidopsis thaliana
AT5G58375 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23596961-23601960 Arabidopsis thaliana
AT5G58375 10.0kb upstream 10.0kb upstream 10689 true Chr5: 23586272-23596960 Arabidopsis thaliana
AT5G58375 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23586272-23596271 Arabidopsis thaliana
AT5G58375 10.0kb downstream 10.0kb downstream 10689 true Chr5: 23596272-23606960 Arabidopsis thaliana
AT5G58375 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23596961-23606960 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364647 5261 Brassicaceae View MSA
123829298 5264 Brassicales-Malvales View MSA
124346052 5266 SBM View MSA
124242342 5268 Malvidae View MSA
124067801 5270 Rosid View MSA
123745806 5271 Pentapetalae View MSA
122791718 5272 Eudicot View MSA
122044288 5273 Angiosperm View MSA
121345647 5274 Embryophyte View MSA
123380250 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.622     High Low
cufflinks 107.348     High High
cufflinks 33.575     High  
cufflinks 102.27     High  
cufflinks 41.383     High  
cufflinks 82.543     High  

0 Strain