Gene : AT5G58300 A. thaliana TAIR10
Defline:  (1 of 37) PF00069//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  5319
Name:  ? AT5G58300 Secondary Identifier:  ? PAC:19670340
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58300 0.5kb upstream 0.5kb upstream 3706 true Chr5: 23571379-23575084 Arabidopsis thaliana
AT5G58300 0.5kb upstream 0.5kb upstream 500 false Chr5: 23571379-23571878 Arabidopsis thaliana
AT5G58300 0.5kb downstream 0.5kb downstream 3706 true Chr5: 23571879-23575584 Arabidopsis thaliana
AT5G58300 0.5kb downstream 0.5kb downstream 500 false Chr5: 23575085-23575584 Arabidopsis thaliana
AT5G58300 1.0kb upstream 1.0kb upstream 4206 true Chr5: 23570879-23575084 Arabidopsis thaliana
AT5G58300 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23570879-23571878 Arabidopsis thaliana
AT5G58300 1.0kb downstream 1.0kb downstream 4206 true Chr5: 23571879-23576084 Arabidopsis thaliana
AT5G58300 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23575085-23576084 Arabidopsis thaliana
AT5G58300 2.0kb upstream 2.0kb upstream 5206 true Chr5: 23569879-23575084 Arabidopsis thaliana
AT5G58300 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23569879-23571878 Arabidopsis thaliana
AT5G58300 2.0kb downstream 2.0kb downstream 5206 true Chr5: 23571879-23577084 Arabidopsis thaliana
AT5G58300 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23575085-23577084 Arabidopsis thaliana
AT5G58300 5.0kb upstream 5.0kb upstream 8206 true Chr5: 23566879-23575084 Arabidopsis thaliana
AT5G58300 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23566879-23571878 Arabidopsis thaliana
AT5G58300 5.0kb downstream 5.0kb downstream 8206 true Chr5: 23571879-23580084 Arabidopsis thaliana
AT5G58300 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23575085-23580084 Arabidopsis thaliana
AT5G58300 10.0kb upstream 10.0kb upstream 13206 true Chr5: 23561879-23575084 Arabidopsis thaliana
AT5G58300 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23561879-23571878 Arabidopsis thaliana
AT5G58300 10.0kb downstream 10.0kb downstream 13206 true Chr5: 23571879-23585084 Arabidopsis thaliana
AT5G58300 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23575085-23585084 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360992 5261 Brassicaceae View MSA
123829934 5264 Brassicales-Malvales View MSA
124338479 5266 SBM View MSA
124251902 5268 Malvidae View MSA
124062760 5270 Rosid View MSA
123745709 5271 Pentapetalae View MSA
122790353 5272 Eudicot View MSA
122049764 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351227 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.001        
cufflinks 12.842        
cufflinks 3.956        
cufflinks 13.618        
cufflinks 3.125       Low
cufflinks 14.814       High

0 Strain