Gene : AT5G58160 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23213:SF232 - FORMIN-LIKE PROTEIN 13 Genomic Order:  5305
Name:  ? AT5G58160 Secondary Identifier:  ? PAC:19671898
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58160 0.5kb upstream 0.5kb upstream 6265 true Chr5: 23533201-23539465 Arabidopsis thaliana
AT5G58160 0.5kb upstream 0.5kb upstream 500 false Chr5: 23533201-23533700 Arabidopsis thaliana
AT5G58160 0.5kb downstream 0.5kb downstream 6265 true Chr5: 23533701-23539965 Arabidopsis thaliana
AT5G58160 0.5kb downstream 0.5kb downstream 500 false Chr5: 23539466-23539965 Arabidopsis thaliana
AT5G58160 1.0kb upstream 1.0kb upstream 6765 true Chr5: 23532701-23539465 Arabidopsis thaliana
AT5G58160 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23532701-23533700 Arabidopsis thaliana
AT5G58160 1.0kb downstream 1.0kb downstream 6765 true Chr5: 23533701-23540465 Arabidopsis thaliana
AT5G58160 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23539466-23540465 Arabidopsis thaliana
AT5G58160 2.0kb upstream 2.0kb upstream 7765 true Chr5: 23531701-23539465 Arabidopsis thaliana
AT5G58160 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23531701-23533700 Arabidopsis thaliana
AT5G58160 2.0kb downstream 2.0kb downstream 7765 true Chr5: 23533701-23541465 Arabidopsis thaliana
AT5G58160 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23539466-23541465 Arabidopsis thaliana
AT5G58160 5.0kb upstream 5.0kb upstream 10765 true Chr5: 23528701-23539465 Arabidopsis thaliana
AT5G58160 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23528701-23533700 Arabidopsis thaliana
AT5G58160 5.0kb downstream 5.0kb downstream 10765 true Chr5: 23533701-23544465 Arabidopsis thaliana
AT5G58160 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23539466-23544465 Arabidopsis thaliana
AT5G58160 10.0kb upstream 10.0kb upstream 15765 true Chr5: 23523701-23539465 Arabidopsis thaliana
AT5G58160 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23523701-23533700 Arabidopsis thaliana
AT5G58160 10.0kb downstream 10.0kb downstream 15765 true Chr5: 23533701-23549465 Arabidopsis thaliana
AT5G58160 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23539466-23549465 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378385 5261 Brassicaceae View MSA
123835644 5264 Brassicales-Malvales View MSA
124346791 5266 SBM View MSA
124251709 5268 Malvidae View MSA
124070302 5270 Rosid View MSA
123751322 5271 Pentapetalae View MSA
122795488 5272 Eudicot View MSA
122050252 5273 Angiosperm View MSA
121351212 5274 Embryophyte View MSA
123428124 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.138        
cufflinks 4.836        
cufflinks 1.814       Low
cufflinks 5.013        
cufflinks 1.808       Low
cufflinks 5.282        

0 Strain