Gene : AT5G61390 A. thaliana TAIR10
Defline:  (1 of 4) PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Genomic Order:  5642
Name:  ? AT5G61390 Secondary Identifier:  ? PAC:19672143
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G61390 0.5kb upstream 0.5kb upstream 2783 true Chr5: 24678662-24681444 Arabidopsis thaliana
AT5G61390 0.5kb upstream 0.5kb upstream 500 false Chr5: 24680945-24681444 Arabidopsis thaliana
AT5G61390 0.5kb downstream 0.5kb downstream 2783 true Chr5: 24678162-24680944 Arabidopsis thaliana
AT5G61390 0.5kb downstream 0.5kb downstream 500 false Chr5: 24678162-24678661 Arabidopsis thaliana
AT5G61390 1.0kb upstream 1.0kb upstream 3283 true Chr5: 24678662-24681944 Arabidopsis thaliana
AT5G61390 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24680945-24681944 Arabidopsis thaliana
AT5G61390 1.0kb downstream 1.0kb downstream 3283 true Chr5: 24677662-24680944 Arabidopsis thaliana
AT5G61390 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24677662-24678661 Arabidopsis thaliana
AT5G61390 2.0kb upstream 2.0kb upstream 4283 true Chr5: 24678662-24682944 Arabidopsis thaliana
AT5G61390 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24680945-24682944 Arabidopsis thaliana
AT5G61390 2.0kb downstream 2.0kb downstream 4283 true Chr5: 24676662-24680944 Arabidopsis thaliana
AT5G61390 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24676662-24678661 Arabidopsis thaliana
AT5G61390 5.0kb upstream 5.0kb upstream 7283 true Chr5: 24678662-24685944 Arabidopsis thaliana
AT5G61390 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24680945-24685944 Arabidopsis thaliana
AT5G61390 5.0kb downstream 5.0kb downstream 7283 true Chr5: 24673662-24680944 Arabidopsis thaliana
AT5G61390 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24673662-24678661 Arabidopsis thaliana
AT5G61390 10.0kb upstream 10.0kb upstream 12283 true Chr5: 24678662-24690944 Arabidopsis thaliana
AT5G61390 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24680945-24690944 Arabidopsis thaliana
AT5G61390 10.0kb downstream 10.0kb downstream 12283 true Chr5: 24668662-24680944 Arabidopsis thaliana
AT5G61390 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24668662-24678661 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364922 5261 Brassicaceae View MSA
123835706 5264 Brassicales-Malvales View MSA
124342135 5266 SBM View MSA
124245677 5268 Malvidae View MSA
124064208 5270 Rosid View MSA
123738058 5271 Pentapetalae View MSA
122790887 5272 Eudicot View MSA
122046626 5273 Angiosperm View MSA
121346435 5274 Embryophyte View MSA
123380384 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.719        
cufflinks 3.05        
cufflinks 1.452       Low
cufflinks 3.625        
cufflinks 1.958        
cufflinks 3.362        

0 Strain