Gene : MYB28 A. thaliana TAIR10
Primary Identifier:  ? AT5G61420 Defline:  (1 of 5) PTHR10641//PTHR10641:SF537 - MYB-LIKE DNA-BINDING PROTEIN MYB // F21H2.9 PROTEIN-RELATED
Genomic Order:  5646 Name:  ? AT5G61420
Secondary Identifier:  ? PAC:19671087
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G61420 0.5kb upstream 0.5kb upstream 2445 true Chr5: 24689151-24691595 Arabidopsis thaliana
AT5G61420 0.5kb upstream 0.5kb upstream 500 false Chr5: 24691096-24691595 Arabidopsis thaliana
AT5G61420 0.5kb downstream 0.5kb downstream 2445 true Chr5: 24688651-24691095 Arabidopsis thaliana
AT5G61420 0.5kb downstream 0.5kb downstream 500 false Chr5: 24688651-24689150 Arabidopsis thaliana
AT5G61420 1.0kb upstream 1.0kb upstream 2945 true Chr5: 24689151-24692095 Arabidopsis thaliana
AT5G61420 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24691096-24692095 Arabidopsis thaliana
AT5G61420 1.0kb downstream 1.0kb downstream 2945 true Chr5: 24688151-24691095 Arabidopsis thaliana
AT5G61420 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24688151-24689150 Arabidopsis thaliana
AT5G61420 2.0kb upstream 2.0kb upstream 3945 true Chr5: 24689151-24693095 Arabidopsis thaliana
AT5G61420 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24691096-24693095 Arabidopsis thaliana
AT5G61420 2.0kb downstream 2.0kb downstream 3945 true Chr5: 24687151-24691095 Arabidopsis thaliana
AT5G61420 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24687151-24689150 Arabidopsis thaliana
AT5G61420 5.0kb upstream 5.0kb upstream 6945 true Chr5: 24689151-24696095 Arabidopsis thaliana
AT5G61420 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24691096-24696095 Arabidopsis thaliana
AT5G61420 5.0kb downstream 5.0kb downstream 6945 true Chr5: 24684151-24691095 Arabidopsis thaliana
AT5G61420 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24684151-24689150 Arabidopsis thaliana
AT5G61420 10.0kb upstream 10.0kb upstream 11945 true Chr5: 24689151-24701095 Arabidopsis thaliana
AT5G61420 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24691096-24701095 Arabidopsis thaliana
AT5G61420 10.0kb downstream 10.0kb downstream 11945 true Chr5: 24679151-24691095 Arabidopsis thaliana
AT5G61420 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24679151-24689150 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121785051 5273 Angiosperm View MSA
122363204 5261 Brassicaceae View MSA
123798499 5264 Brassicales-Malvales View MSA
124296126 5266 SBM View MSA
124252245 5268 Malvidae View MSA
124052335 5270 Rosid View MSA
123757279 5271 Pentapetalae View MSA
122778343 5272 Eudicot View MSA
121056452 5274 Embryophyte View MSA
123096362 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.174       High
cufflinks 5.297       Low
cufflinks 14.779       High
cufflinks 7.27        
cufflinks 10.748        
cufflinks 7.352        

0 Strain