Gene : AT5G61260 A. thaliana TAIR10
Defline:  (1 of 4) PTHR33349:SF1 - CALMODULIN-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  5629
Name:  ? AT5G61260 Secondary Identifier:  ? PAC:19670088
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G61260 0.5kb upstream 0.5kb upstream 1991 true Chr5: 24636609-24638599 Arabidopsis thaliana
AT5G61260 0.5kb upstream 0.5kb upstream 500 false Chr5: 24636609-24637108 Arabidopsis thaliana
AT5G61260 0.5kb downstream 0.5kb downstream 1991 true Chr5: 24637109-24639099 Arabidopsis thaliana
AT5G61260 0.5kb downstream 0.5kb downstream 500 false Chr5: 24638600-24639099 Arabidopsis thaliana
AT5G61260 1.0kb upstream 1.0kb upstream 2491 true Chr5: 24636109-24638599 Arabidopsis thaliana
AT5G61260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24636109-24637108 Arabidopsis thaliana
AT5G61260 1.0kb downstream 1.0kb downstream 2491 true Chr5: 24637109-24639599 Arabidopsis thaliana
AT5G61260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24638600-24639599 Arabidopsis thaliana
AT5G61260 2.0kb upstream 2.0kb upstream 3491 true Chr5: 24635109-24638599 Arabidopsis thaliana
AT5G61260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24635109-24637108 Arabidopsis thaliana
AT5G61260 2.0kb downstream 2.0kb downstream 3491 true Chr5: 24637109-24640599 Arabidopsis thaliana
AT5G61260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24638600-24640599 Arabidopsis thaliana
AT5G61260 5.0kb upstream 5.0kb upstream 6491 true Chr5: 24632109-24638599 Arabidopsis thaliana
AT5G61260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24632109-24637108 Arabidopsis thaliana
AT5G61260 5.0kb downstream 5.0kb downstream 6491 true Chr5: 24637109-24643599 Arabidopsis thaliana
AT5G61260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24638600-24643599 Arabidopsis thaliana
AT5G61260 10.0kb upstream 10.0kb upstream 11491 true Chr5: 24627109-24638599 Arabidopsis thaliana
AT5G61260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24627109-24637108 Arabidopsis thaliana
AT5G61260 10.0kb downstream 10.0kb downstream 11491 true Chr5: 24637109-24648599 Arabidopsis thaliana
AT5G61260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24638600-24648599 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370325 5261 Brassicaceae View MSA
123799940 5264 Brassicales-Malvales View MSA
124297408 5266 SBM View MSA
124251755 5268 Malvidae View MSA
124071368 5270 Rosid View MSA
123747266 5271 Pentapetalae View MSA
122791700 5272 Eudicot View MSA
122049336 5273 Angiosperm View MSA
121311351 5274 Embryophyte View MSA
123348657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.259        
cufflinks 3.354        
cufflinks 0.709       Low
cufflinks 4.772       High
cufflinks 0.723       Low
cufflinks 3.193        

0 Strain