Gene : AT5G60980 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10693//PTHR10693:SF24 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  5601
Name:  ? AT5G60980 Secondary Identifier:  ? PAC:19672783
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60980 0.5kb upstream 0.5kb upstream 3410 true Chr5: 24542860-24546269 Arabidopsis thaliana
AT5G60980 0.5kb upstream 0.5kb upstream 500 false Chr5: 24542860-24543359 Arabidopsis thaliana
AT5G60980 0.5kb downstream 0.5kb downstream 3410 true Chr5: 24543360-24546769 Arabidopsis thaliana
AT5G60980 0.5kb downstream 0.5kb downstream 500 false Chr5: 24546270-24546769 Arabidopsis thaliana
AT5G60980 1.0kb upstream 1.0kb upstream 3910 true Chr5: 24542360-24546269 Arabidopsis thaliana
AT5G60980 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24542360-24543359 Arabidopsis thaliana
AT5G60980 1.0kb downstream 1.0kb downstream 3910 true Chr5: 24543360-24547269 Arabidopsis thaliana
AT5G60980 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24546270-24547269 Arabidopsis thaliana
AT5G60980 2.0kb upstream 2.0kb upstream 4910 true Chr5: 24541360-24546269 Arabidopsis thaliana
AT5G60980 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24541360-24543359 Arabidopsis thaliana
AT5G60980 2.0kb downstream 2.0kb downstream 4910 true Chr5: 24543360-24548269 Arabidopsis thaliana
AT5G60980 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24546270-24548269 Arabidopsis thaliana
AT5G60980 5.0kb upstream 5.0kb upstream 7910 true Chr5: 24538360-24546269 Arabidopsis thaliana
AT5G60980 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24538360-24543359 Arabidopsis thaliana
AT5G60980 5.0kb downstream 5.0kb downstream 7910 true Chr5: 24543360-24551269 Arabidopsis thaliana
AT5G60980 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24546270-24551269 Arabidopsis thaliana
AT5G60980 10.0kb upstream 10.0kb upstream 12910 true Chr5: 24533360-24546269 Arabidopsis thaliana
AT5G60980 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24533360-24543359 Arabidopsis thaliana
AT5G60980 10.0kb downstream 10.0kb downstream 12910 true Chr5: 24543360-24556269 Arabidopsis thaliana
AT5G60980 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24546270-24556269 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362802 5261 Brassicaceae View MSA
123828287 5264 Brassicales-Malvales View MSA
124346601 5266 SBM View MSA
124253817 5268 Malvidae View MSA
124070986 5270 Rosid View MSA
123751309 5271 Pentapetalae View MSA
122795066 5272 Eudicot View MSA
122049730 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.908        
cufflinks 27.467        
cufflinks 14.391        
cufflinks 26.569        
cufflinks 12.814       Low
cufflinks 28.566       High

0 Strain