Gene : AT5G60870 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22870:SF138 - REGULATOR OF CHROMOSOME CONDENSATION DOMAIN-CONTAINING PROTEIN Genomic Order:  5588
Name:  ? AT5G60870 Secondary Identifier:  ? PAC:19668426
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60870 0.5kb upstream 0.5kb upstream 2670 true Chr5: 24485655-24488324 Arabidopsis thaliana
AT5G60870 0.5kb upstream 0.5kb upstream 500 false Chr5: 24487825-24488324 Arabidopsis thaliana
AT5G60870 0.5kb downstream 0.5kb downstream 2670 true Chr5: 24485155-24487824 Arabidopsis thaliana
AT5G60870 0.5kb downstream 0.5kb downstream 500 false Chr5: 24485155-24485654 Arabidopsis thaliana
AT5G60870 1.0kb upstream 1.0kb upstream 3170 true Chr5: 24485655-24488824 Arabidopsis thaliana
AT5G60870 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24487825-24488824 Arabidopsis thaliana
AT5G60870 1.0kb downstream 1.0kb downstream 3170 true Chr5: 24484655-24487824 Arabidopsis thaliana
AT5G60870 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24484655-24485654 Arabidopsis thaliana
AT5G60870 2.0kb upstream 2.0kb upstream 4170 true Chr5: 24485655-24489824 Arabidopsis thaliana
AT5G60870 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24487825-24489824 Arabidopsis thaliana
AT5G60870 2.0kb downstream 2.0kb downstream 4170 true Chr5: 24483655-24487824 Arabidopsis thaliana
AT5G60870 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24483655-24485654 Arabidopsis thaliana
AT5G60870 5.0kb upstream 5.0kb upstream 7170 true Chr5: 24485655-24492824 Arabidopsis thaliana
AT5G60870 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24487825-24492824 Arabidopsis thaliana
AT5G60870 5.0kb downstream 5.0kb downstream 7170 true Chr5: 24480655-24487824 Arabidopsis thaliana
AT5G60870 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24480655-24485654 Arabidopsis thaliana
AT5G60870 10.0kb upstream 10.0kb upstream 12170 true Chr5: 24485655-24497824 Arabidopsis thaliana
AT5G60870 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24487825-24497824 Arabidopsis thaliana
AT5G60870 10.0kb downstream 10.0kb downstream 12170 true Chr5: 24475655-24487824 Arabidopsis thaliana
AT5G60870 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24475655-24485654 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367726 5261 Brassicaceae View MSA
123832396 5264 Brassicales-Malvales View MSA
124336762 5266 SBM View MSA
124240058 5268 Malvidae View MSA
124071462 5270 Rosid View MSA
123750397 5271 Pentapetalae View MSA
122786735 5272 Eudicot View MSA
122049165 5273 Angiosperm View MSA
121344608 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.916        
cufflinks 1.685        
cufflinks 0.75       Low
cufflinks 1.76        
cufflinks 0.801        
cufflinks 1.652        

0 Strain