Gene : AGL8 A. thaliana TAIR10
Primary Identifier:  ? AT5G60910 Defline:  (1 of 1) PTHR11945//PTHR11945:SF155//PTHR11945:SF163 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  5592 Name:  ? AT5G60910
Secondary Identifier:  ? PAC:19670614
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60910 0.5kb upstream 0.5kb upstream 4162 true Chr5: 24502482-24506643 Arabidopsis thaliana
AT5G60910 0.5kb upstream 0.5kb upstream 500 false Chr5: 24506144-24506643 Arabidopsis thaliana
AT5G60910 0.5kb downstream 0.5kb downstream 4162 true Chr5: 24501982-24506143 Arabidopsis thaliana
AT5G60910 0.5kb downstream 0.5kb downstream 500 false Chr5: 24501982-24502481 Arabidopsis thaliana
AT5G60910 1.0kb upstream 1.0kb upstream 4662 true Chr5: 24502482-24507143 Arabidopsis thaliana
AT5G60910 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24506144-24507143 Arabidopsis thaliana
AT5G60910 1.0kb downstream 1.0kb downstream 4662 true Chr5: 24501482-24506143 Arabidopsis thaliana
AT5G60910 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24501482-24502481 Arabidopsis thaliana
AT5G60910 2.0kb upstream 2.0kb upstream 5662 true Chr5: 24502482-24508143 Arabidopsis thaliana
AT5G60910 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24506144-24508143 Arabidopsis thaliana
AT5G60910 2.0kb downstream 2.0kb downstream 5662 true Chr5: 24500482-24506143 Arabidopsis thaliana
AT5G60910 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24500482-24502481 Arabidopsis thaliana
AT5G60910 5.0kb upstream 5.0kb upstream 8662 true Chr5: 24502482-24511143 Arabidopsis thaliana
AT5G60910 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24506144-24511143 Arabidopsis thaliana
AT5G60910 5.0kb downstream 5.0kb downstream 8662 true Chr5: 24497482-24506143 Arabidopsis thaliana
AT5G60910 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24497482-24502481 Arabidopsis thaliana
AT5G60910 10.0kb upstream 10.0kb upstream 13662 true Chr5: 24502482-24516143 Arabidopsis thaliana
AT5G60910 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24506144-24516143 Arabidopsis thaliana
AT5G60910 10.0kb downstream 10.0kb downstream 13662 true Chr5: 24492482-24506143 Arabidopsis thaliana
AT5G60910 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24492482-24502481 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122377747 5261 Brassicaceae View MSA
123834442 5264 Brassicales-Malvales View MSA
124348163 5266 SBM View MSA
124246685 5268 Malvidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01        
cufflinks 0.166     Low Low
cufflinks 0.88        
cufflinks 0.243     Low  
cufflinks 1.079        
cufflinks 0.274     Low  

0 Strain