Gene : AT5G60750 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  5575
Name:  ? AT5G60750 Secondary Identifier:  ? PAC:19668915
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60750 0.5kb upstream 0.5kb upstream 2970 true Chr5: 24430391-24433360 Arabidopsis thaliana
AT5G60750 0.5kb upstream 0.5kb upstream 500 false Chr5: 24430391-24430890 Arabidopsis thaliana
AT5G60750 0.5kb downstream 0.5kb downstream 2970 true Chr5: 24430891-24433860 Arabidopsis thaliana
AT5G60750 0.5kb downstream 0.5kb downstream 500 false Chr5: 24433361-24433860 Arabidopsis thaliana
AT5G60750 1.0kb upstream 1.0kb upstream 3470 true Chr5: 24429891-24433360 Arabidopsis thaliana
AT5G60750 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24429891-24430890 Arabidopsis thaliana
AT5G60750 1.0kb downstream 1.0kb downstream 3470 true Chr5: 24430891-24434360 Arabidopsis thaliana
AT5G60750 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24433361-24434360 Arabidopsis thaliana
AT5G60750 2.0kb upstream 2.0kb upstream 4470 true Chr5: 24428891-24433360 Arabidopsis thaliana
AT5G60750 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24428891-24430890 Arabidopsis thaliana
AT5G60750 2.0kb downstream 2.0kb downstream 4470 true Chr5: 24430891-24435360 Arabidopsis thaliana
AT5G60750 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24433361-24435360 Arabidopsis thaliana
AT5G60750 5.0kb upstream 5.0kb upstream 7470 true Chr5: 24425891-24433360 Arabidopsis thaliana
AT5G60750 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24425891-24430890 Arabidopsis thaliana
AT5G60750 5.0kb downstream 5.0kb downstream 7470 true Chr5: 24430891-24438360 Arabidopsis thaliana
AT5G60750 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24433361-24438360 Arabidopsis thaliana
AT5G60750 10.0kb upstream 10.0kb upstream 12470 true Chr5: 24420891-24433360 Arabidopsis thaliana
AT5G60750 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24420891-24430890 Arabidopsis thaliana
AT5G60750 10.0kb downstream 10.0kb downstream 12470 true Chr5: 24430891-24443360 Arabidopsis thaliana
AT5G60750 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24433361-24443360 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363091 5261 Brassicaceae View MSA
123840501 5264 Brassicales-Malvales View MSA
124338425 5266 SBM View MSA
124237308 5268 Malvidae View MSA
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.895       High
cufflinks 5.737       Low
cufflinks 11.792        
cufflinks 6.752        
cufflinks 11.241        
cufflinks 6.16        

0 Strain