Gene : NRT2.3 A. thaliana TAIR10
Primary Identifier:  ? AT5G60780 Defline:  (1 of 3) PTHR23515//PTHR23515:SF2 - FAMILY NOT NAMED // HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED
Genomic Order:  5578 Name:  ? AT5G60780
Secondary Identifier:  ? PAC:19672916
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60780 0.5kb upstream 0.5kb upstream 2418 true Chr5: 24450339-24452756 Arabidopsis thaliana
AT5G60780 0.5kb upstream 0.5kb upstream 500 false Chr5: 24450339-24450838 Arabidopsis thaliana
AT5G60780 0.5kb downstream 0.5kb downstream 2418 true Chr5: 24450839-24453256 Arabidopsis thaliana
AT5G60780 0.5kb downstream 0.5kb downstream 500 false Chr5: 24452757-24453256 Arabidopsis thaliana
AT5G60780 1.0kb upstream 1.0kb upstream 2918 true Chr5: 24449839-24452756 Arabidopsis thaliana
AT5G60780 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24449839-24450838 Arabidopsis thaliana
AT5G60780 1.0kb downstream 1.0kb downstream 2918 true Chr5: 24450839-24453756 Arabidopsis thaliana
AT5G60780 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24452757-24453756 Arabidopsis thaliana
AT5G60780 2.0kb upstream 2.0kb upstream 3918 true Chr5: 24448839-24452756 Arabidopsis thaliana
AT5G60780 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24448839-24450838 Arabidopsis thaliana
AT5G60780 2.0kb downstream 2.0kb downstream 3918 true Chr5: 24450839-24454756 Arabidopsis thaliana
AT5G60780 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24452757-24454756 Arabidopsis thaliana
AT5G60780 5.0kb upstream 5.0kb upstream 6918 true Chr5: 24445839-24452756 Arabidopsis thaliana
AT5G60780 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24445839-24450838 Arabidopsis thaliana
AT5G60780 5.0kb downstream 5.0kb downstream 6918 true Chr5: 24450839-24457756 Arabidopsis thaliana
AT5G60780 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24452757-24457756 Arabidopsis thaliana
AT5G60780 10.0kb upstream 10.0kb upstream 11918 true Chr5: 24440839-24452756 Arabidopsis thaliana
AT5G60780 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24440839-24450838 Arabidopsis thaliana
AT5G60780 10.0kb downstream 10.0kb downstream 11918 true Chr5: 24450839-24462756 Arabidopsis thaliana
AT5G60780 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24452757-24462756 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376784 5261 Brassicaceae View MSA
123839369 5264 Brassicales-Malvales View MSA
124350411 5266 SBM View MSA
124244779 5268 Malvidae View MSA
124041597 5270 Rosid View MSA
123747168 5271 Pentapetalae View MSA
122786429 5272 Eudicot View MSA
122041882 5273 Angiosperm View MSA
121350710 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.242     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.026     Low  

0 Strain