Gene : AT5G60800 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22814:SF100 - HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  5580
Name:  ? AT5G60800 Secondary Identifier:  ? PAC:19668679
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60800 0.5kb upstream 0.5kb upstream 2259 true Chr5: 24460783-24463041 Arabidopsis thaliana
AT5G60800 0.5kb upstream 0.5kb upstream 500 false Chr5: 24462542-24463041 Arabidopsis thaliana
AT5G60800 0.5kb downstream 0.5kb downstream 2259 true Chr5: 24460283-24462541 Arabidopsis thaliana
AT5G60800 0.5kb downstream 0.5kb downstream 500 false Chr5: 24460283-24460782 Arabidopsis thaliana
AT5G60800 1.0kb upstream 1.0kb upstream 2759 true Chr5: 24460783-24463541 Arabidopsis thaliana
AT5G60800 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24462542-24463541 Arabidopsis thaliana
AT5G60800 1.0kb downstream 1.0kb downstream 2759 true Chr5: 24459783-24462541 Arabidopsis thaliana
AT5G60800 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24459783-24460782 Arabidopsis thaliana
AT5G60800 2.0kb upstream 2.0kb upstream 3759 true Chr5: 24460783-24464541 Arabidopsis thaliana
AT5G60800 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24462542-24464541 Arabidopsis thaliana
AT5G60800 2.0kb downstream 2.0kb downstream 3759 true Chr5: 24458783-24462541 Arabidopsis thaliana
AT5G60800 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24458783-24460782 Arabidopsis thaliana
AT5G60800 5.0kb upstream 5.0kb upstream 6759 true Chr5: 24460783-24467541 Arabidopsis thaliana
AT5G60800 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24462542-24467541 Arabidopsis thaliana
AT5G60800 5.0kb downstream 5.0kb downstream 6759 true Chr5: 24455783-24462541 Arabidopsis thaliana
AT5G60800 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24455783-24460782 Arabidopsis thaliana
AT5G60800 10.0kb upstream 10.0kb upstream 11759 true Chr5: 24460783-24472541 Arabidopsis thaliana
AT5G60800 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24462542-24472541 Arabidopsis thaliana
AT5G60800 10.0kb downstream 10.0kb downstream 11759 true Chr5: 24450783-24462541 Arabidopsis thaliana
AT5G60800 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24450783-24460782 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361887 5261 Brassicaceae View MSA
123839566 5264 Brassicales-Malvales View MSA
124346614 5266 SBM View MSA
124250176 5268 Malvidae View MSA
124064314 5270 Rosid View MSA
123746961 5271 Pentapetalae View MSA
122796317 5272 Eudicot View MSA
122045466 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.932       High
cufflinks 2.011        
cufflinks 3.97        
cufflinks 2.305        
cufflinks 7.124        
cufflinks 2.252        

0 Strain