Gene : AT5G60670 A. thaliana TAIR10
Defline:  (1 of 3) K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Genomic Order:  5567
Name:  ? AT5G60670 Secondary Identifier:  ? PAC:19669054
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60670 0.5kb upstream 0.5kb upstream 1184 true Chr5: 24380910-24382093 Arabidopsis thaliana
AT5G60670 0.5kb upstream 0.5kb upstream 500 false Chr5: 24381594-24382093 Arabidopsis thaliana
AT5G60670 0.5kb downstream 0.5kb downstream 1184 true Chr5: 24380410-24381593 Arabidopsis thaliana
AT5G60670 0.5kb downstream 0.5kb downstream 500 false Chr5: 24380410-24380909 Arabidopsis thaliana
AT5G60670 1.0kb upstream 1.0kb upstream 1684 true Chr5: 24380910-24382593 Arabidopsis thaliana
AT5G60670 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24381594-24382593 Arabidopsis thaliana
AT5G60670 1.0kb downstream 1.0kb downstream 1684 true Chr5: 24379910-24381593 Arabidopsis thaliana
AT5G60670 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24379910-24380909 Arabidopsis thaliana
AT5G60670 2.0kb upstream 2.0kb upstream 2684 true Chr5: 24380910-24383593 Arabidopsis thaliana
AT5G60670 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24381594-24383593 Arabidopsis thaliana
AT5G60670 2.0kb downstream 2.0kb downstream 2684 true Chr5: 24378910-24381593 Arabidopsis thaliana
AT5G60670 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24378910-24380909 Arabidopsis thaliana
AT5G60670 5.0kb upstream 5.0kb upstream 5684 true Chr5: 24380910-24386593 Arabidopsis thaliana
AT5G60670 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24381594-24386593 Arabidopsis thaliana
AT5G60670 5.0kb downstream 5.0kb downstream 5684 true Chr5: 24375910-24381593 Arabidopsis thaliana
AT5G60670 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24375910-24380909 Arabidopsis thaliana
AT5G60670 10.0kb upstream 10.0kb upstream 10684 true Chr5: 24380910-24391593 Arabidopsis thaliana
AT5G60670 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24381594-24391593 Arabidopsis thaliana
AT5G60670 10.0kb downstream 10.0kb downstream 10684 true Chr5: 24370910-24381593 Arabidopsis thaliana
AT5G60670 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24370910-24380909 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378383 5261 Brassicaceae View MSA
123836781 5264 Brassicales-Malvales View MSA
124350930 5266 SBM View MSA
124254626 5268 Malvidae View MSA
124068553 5270 Rosid View MSA
123746729 5271 Pentapetalae View MSA
122788263 5272 Eudicot View MSA
122050201 5273 Angiosperm View MSA
121345263 5274 Embryophyte View MSA
123424135 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.171     High  
cufflinks 122.73     High  
cufflinks 69.643     High  
cufflinks 112.315     High  
cufflinks 50.141     High Low
cufflinks 129.608     High High

0 Strain