Gene : AT5G60590 A. thaliana TAIR10
Defline:  (1 of 2) PTHR17490 - SUA5 Genomic Order:  5558
Name:  ? AT5G60590 Secondary Identifier:  ? PAC:19665775
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60590 0.5kb upstream 0.5kb upstream 2230 true Chr5: 24356521-24358750 Arabidopsis thaliana
AT5G60590 0.5kb upstream 0.5kb upstream 500 false Chr5: 24356521-24357020 Arabidopsis thaliana
AT5G60590 0.5kb downstream 0.5kb downstream 2230 true Chr5: 24357021-24359250 Arabidopsis thaliana
AT5G60590 0.5kb downstream 0.5kb downstream 500 false Chr5: 24358751-24359250 Arabidopsis thaliana
AT5G60590 1.0kb upstream 1.0kb upstream 2730 true Chr5: 24356021-24358750 Arabidopsis thaliana
AT5G60590 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24356021-24357020 Arabidopsis thaliana
AT5G60590 1.0kb downstream 1.0kb downstream 2730 true Chr5: 24357021-24359750 Arabidopsis thaliana
AT5G60590 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24358751-24359750 Arabidopsis thaliana
AT5G60590 2.0kb upstream 2.0kb upstream 3730 true Chr5: 24355021-24358750 Arabidopsis thaliana
AT5G60590 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24355021-24357020 Arabidopsis thaliana
AT5G60590 2.0kb downstream 2.0kb downstream 3730 true Chr5: 24357021-24360750 Arabidopsis thaliana
AT5G60590 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24358751-24360750 Arabidopsis thaliana
AT5G60590 5.0kb upstream 5.0kb upstream 6730 true Chr5: 24352021-24358750 Arabidopsis thaliana
AT5G60590 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24352021-24357020 Arabidopsis thaliana
AT5G60590 5.0kb downstream 5.0kb downstream 6730 true Chr5: 24357021-24363750 Arabidopsis thaliana
AT5G60590 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24358751-24363750 Arabidopsis thaliana
AT5G60590 10.0kb upstream 10.0kb upstream 11730 true Chr5: 24347021-24358750 Arabidopsis thaliana
AT5G60590 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24347021-24357020 Arabidopsis thaliana
AT5G60590 10.0kb downstream 10.0kb downstream 11730 true Chr5: 24357021-24368750 Arabidopsis thaliana
AT5G60590 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24358751-24368750 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041229 5273 Angiosperm View MSA
122360207 5261 Brassicaceae View MSA
123835197 5264 Brassicales-Malvales View MSA
124345854 5266 SBM View MSA
124243059 5268 Malvidae View MSA
124060632 5270 Rosid View MSA
123738638 5271 Pentapetalae View MSA
122789865 5272 Eudicot View MSA
121344948 5274 Embryophyte View MSA
123425392 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.761        
cufflinks 3.161        
cufflinks 2.217       Low
cufflinks 3.716       High
cufflinks 2.378        
cufflinks 3.274        

0 Strain